Difference between revisions of "TSS:Hg 104525.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=43 | |distance_to_tss=43 | ||
|end=29409580 | |end=29409580 | ||
| + | |end_of_center_position=29409577 | ||
|entrez_id=102724316 | |entrez_id=102724316 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=29409573 | |start=29409573 | ||
| + | |start_of_center_position=29409576 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000446807.5 uc057smn.1 BC031656 | |transcript_name=ENST00000446807.5 uc057smn.1 BC031656 | ||
Revision as of 01:44, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 29409576 |
|---|---|
| End of the center position in the TSS region: | 29409577 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000446807.5 uc057smn.1 BC031656 |
|---|---|
| Distance: | 0 |
| Num_trans: | 40 |
| All_trans: | ENST00000446807.5:0 uc057smn.1:0 BC031656:0 ENST00000427063.6:-2 uc001iun.3:-2 BC073888:-2 ENST00000423223.5:6 uc057smo.1:6 ENST00000445521.5:11 uc057smp.1:11 BC063483:11 ENST00000414457.5:-16 uc001iup.4:-16 ENST00000608994.5:-17 ENST00000609413.5:-17 ENST00000623175.3:17 uc057sml.1:-17 uc057smm.1:-17 uc001ium.3:17 AK056080:-17 AL832706:19 BC107795:-20 ENST00000438202.5:22 uc057smq.1:22 BC050354:-27 ENST00000413405.5:-35 uc001iuq.4:-35 BC066966:-35 NR_110929:-40 NR_110927:-40 NR_110926:-40 NR_110925:-40 NR_110924:-40 NR_110923:-40 NR_110922:-40 NR_110921:-40 NR_110920:-40 NR_003930:-40 ENST00000430295.5:-172 uc057smk.1:-172 |
TATA-Box annotation
| Distance to TSS: | 43 |
|---|---|
| Nearest PromoterID: | NR_110926 |
| Entrez ID: | 102724316 |
| Nearest Unigene: | Hs.499209 |
| Nearest Refseq: | NR_003930 |
| Nearest Ensembl: | ENSG00000224597 |
| Gene Name: | SVIL antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | SVIL antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.095 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
