Difference between revisions of "TSS:Hg 232274.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=CU677700:-278 CU678643:-278 CU674703:-278 |chr=chr10 |cpg_percent=0.025 |distance=-278 |distance_to_tss=9907 |end=43386932 |entrez_id=3185 |gc_percent=0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |OK/SW-cl.23= | ||
|all_trans=CU677700:-278 CU678643:-278 CU674703:-278 | |all_trans=CU677700:-278 CU678643:-278 CU674703:-278 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=9907 | |distance_to_tss=9907 | ||
|end=43386932 | |end=43386932 | ||
| + | |end_of_center_position=43568443 | ||
|entrez_id=3185 | |entrez_id=3185 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=HNRPF | + | |gene_alias=HNRPF |
|gene_description=heterogeneous nuclear ribonucleoprotein F | |gene_description=heterogeneous nuclear ribonucleoprotein F | ||
|gene_name=HNRNPF | |gene_name=HNRNPF | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mcs94-1= | ||
|nearest_ensembl=ENSG00000169813 | |nearest_ensembl=ENSG00000169813 | ||
|nearest_promoter_id=NM_001098208 | |nearest_promoter_id=NM_001098208 | ||
| Line 19: | Line 22: | ||
|species=human | |species=human | ||
|start=43386915 | |start=43386915 | ||
| + | |start_of_center_position=43568442 | ||
|strand=+ | |strand=+ | ||
|transcript_name=CU677700 CU678643 CU674703 | |transcript_name=CU677700 CU678643 CU674703 | ||
Revision as of 02:42, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 43568442 |
|---|---|
| End of the center position in the TSS region: | 43568443 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | CU677700 CU678643 CU674703 |
|---|---|
| Distance: | -278 |
| Num_trans: | 3 |
| All_trans: | CU677700:-278 CU678643:-278 CU674703:-278 |
TATA-Box annotation
| Distance to TSS: | 9907 |
|---|---|
| Nearest PromoterID: | NM_001098208 |
| Entrez ID: | 3185 |
| Nearest Unigene: | Hs.808 |
| Nearest Refseq: | NM_004966 |
| Nearest Ensembl: | ENSG00000169813 |
| Gene Name: | HNRNPF |
| Gene Alias: | HNRPF |
| Gene Description: | heterogeneous nuclear ribonucleoprotein F |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
