Difference between revisions of "TSS:Hg 220063.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000374174.1:-50 uc057tcv.1:-50 AB451354:-50 AB451231:-50 DQ234352:-50 AB451398:-50 AB451271:-50 AB527605:-51 HQ258413:-58 KJ891893:-58 U34822:-62...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |JNK-46= | ||
| + | |JNK1= | ||
| + | |JNK1A2= | ||
| + | |JNK21B1/2= | ||
| + | |PRKM8= | ||
| + | |SAPK1= | ||
| + | |SAPK1c= | ||
|all_trans=ENST00000374174.1:-50 uc057tcv.1:-50 AB451354:-50 AB451231:-50 DQ234352:-50 AB451398:-50 AB451271:-50 AB527605:-51 HQ258413:-58 KJ891893:-58 U34822:-62 ENST00000374176.8:-63 uc001jgm.5:-63 U35005:-63 ENST00000374179.7:-67 uc010qgk.4:-67 U35004:-67 L26318:-67 ENST00000374182.7:-68 uc001jgq.5:-68 ENST00000360332.7:-99 NM_002750:-99 NM_139046:-99 NM_001278548:-99 NM_139049:-99 uc009xoa.5:-99 BC130570:-112 BC130572:-112 BC144063:-112 | |all_trans=ENST00000374174.1:-50 uc057tcv.1:-50 AB451354:-50 AB451231:-50 DQ234352:-50 AB451398:-50 AB451271:-50 AB527605:-51 HQ258413:-58 KJ891893:-58 U34822:-62 ENST00000374176.8:-63 uc001jgm.5:-63 U35005:-63 ENST00000374179.7:-67 uc010qgk.4:-67 U35004:-67 L26318:-67 ENST00000374182.7:-68 uc001jgq.5:-68 ENST00000360332.7:-99 NM_002750:-99 NM_139046:-99 NM_001278548:-99 NM_139049:-99 uc009xoa.5:-99 BC130570:-112 BC130572:-112 BC144063:-112 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 13: | ||
|distance_to_tss=99 | |distance_to_tss=99 | ||
|end=48401711 | |end=48401711 | ||
| + | |end_of_center_position=48401711 | ||
|entrez_id=5599 | |entrez_id=5599 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
| − | |gene_alias=JNK | + | |gene_alias=JNK |
|gene_description=mitogen-activated protein kinase 8 | |gene_description=mitogen-activated protein kinase 8 | ||
|gene_id=5599 | |gene_id=5599 | ||
| Line 24: | Line 32: | ||
|species=human | |species=human | ||
|start=48401710 | |start=48401710 | ||
| + | |start_of_center_position=48401710 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000374174.1 uc057tcv.1 AB451354 AB451231 DQ234352 AB451398 AB451271 | |transcript_name=ENST00000374174.1 uc057tcv.1 AB451354 AB451231 DQ234352 AB451398 AB451271 | ||
Revision as of 03:07, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48401710 |
|---|---|
| End of the center position in the TSS region: | 48401711 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374174.1 uc057tcv.1 AB451354 AB451231 DQ234352 AB451398 AB451271 |
|---|---|
| Distance: | -50 |
| Num_trans: | 29 |
| All_trans: | ENST00000374174.1:-50 uc057tcv.1:-50 AB451354:-50 AB451231:-50 DQ234352:-50 AB451398:-50 AB451271:-50 AB527605:-51 HQ258413:-58 KJ891893:-58 U34822:-62 ENST00000374176.8:-63 uc001jgm.5:-63 U35005:-63 ENST00000374179.7:-67 uc010qgk.4:-67 U35004:-67 L26318:-67 ENST00000374182.7:-68 uc001jgq.5:-68 ENST00000360332.7:-99 NM_002750:-99 NM_139046:-99 NM_001278548:-99 NM_139049:-99 uc009xoa.5:-99 BC130570:-112 BC130572:-112 BC144063:-112 |
TATA-Box annotation
| Distance to TSS: | 99 |
|---|---|
| Nearest PromoterID: | NM_001278548 |
| Entrez ID: | 5599 |
| Nearest Unigene: | Hs.138211 |
| Nearest Refseq: | NM_002750 |
| Nearest Ensembl: | ENSG00000107643 |
| Gene Name: | mitogen-activated protein kinase 8 |
| Gene Alias: | JNK |
| Gene Description: | mitogen-activated protein kinase 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
