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Difference between revisions of "TSS:Hg 105406.1"

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Line 7: Line 7:
 
|distance_to_tss=401
 
|distance_to_tss=401
 
|end=70816359
 
|end=70816359
 +
|end_of_center_position=70816350
 
|entrez_id=8879
 
|entrez_id=8879
 
|gc_percent=0.746269
 
|gc_percent=0.746269
|gene_alias=S1PL|SPL
+
|gene_alias=S1PL
 
|gene_description=sphingosine-1-phosphate lyase 1
 
|gene_description=sphingosine-1-phosphate lyase 1
 
|gene_id=8879
 
|gene_id=8879
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=70816339
 
|start=70816339
 +
|start_of_center_position=70816349
 
|strand=+
 
|strand=+
 
|transcript_name=AK314615
 
|transcript_name=AK314615

Revision as of 04:43, 12 May 2019

Basic information about the TSS


TSS ID:hg_105406.1
Species:human
Chr:chr10
TSS Classification:yes
Start:70816339
End:70816359
Strand:+
TSS Score:1
Start of the center position in the TSS region:70816349
End of the center position in the TSS region:70816350



Gene and protein annotation


Transcript_name:AK314615
Distance:25
GeneID:8879
HGNC/MGI_ID:HGNC:10817
UniProt_ID:
Gene_name:sphingosine-1-phosphate lyase 1
Gene_symbol:SGPL1
Gene_synonyms:SPL
Gene_source:HGNC:10817



Transcript annotation


Transcript_name:AK314615
Distance:25
Num_trans:14
All_trans:AK314615:25 AJ011304:-308 ENST00000373202.7:-370 uc001jrm.4:-370 AB033078:-370 ENST00000486993.1:-379 uc001jrl.3:-379 BC051238:-379 BC068061:-379 BC052991:-380 NM_003901:-392 AB384155:495 AF144638:495 KJ897928:495



TATA-Box annotation


Distance to TSS:401
Nearest PromoterID:NM_003901
Entrez ID:8879
Nearest Unigene:Hs.499984
Nearest Refseq:NM_003901
Nearest Ensembl:ENSG00000166224
Gene Name:sphingosine-1-phosphate lyase 1
Gene Alias:S1PL
Gene Description:sphingosine-1-phosphate lyase 1
Gene Type:protein-coding
CpG%:0.11
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):