Difference between revisions of "TSS:Hg 105840.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=13741 | |distance_to_tss=13741 | ||
|end=79935364 | |end=79935364 | ||
| + | |end_of_center_position=79935364 | ||
|entrez_id=6441 | |entrez_id=6441 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=COLEC7 | + | |gene_alias=COLEC7 |
|gene_description=surfactant protein D | |gene_description=surfactant protein D | ||
|gene_name=SFTPD | |gene_name=SFTPD | ||
| Line 21: | Line 22: | ||
|species=human | |species=human | ||
|start=79935363 | |start=79935363 | ||
| + | |start_of_center_position=79935363 | ||
|strand=+ | |strand=+ | ||
|tata_box="60(TCCTTTTTAAGC,-,0.00),62(CTTTTTAAGCCC,+,0.00)" | |tata_box="60(TCCTTTTTAAGC,-,0.00),62(CTTTTTAAGCCC,+,0.00)" | ||
Revision as of 05:53, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 79935363 |
|---|---|
| End of the center position in the TSS region: | 79935364 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 13741 |
|---|---|
| Nearest PromoterID: | NM_003019 |
| Entrez ID: | 6441 |
| Nearest Unigene: | Hs.253495 |
| Nearest Refseq: | NM_003019 |
| Nearest Ensembl: | ENSG00000133661 |
| Gene Name: | SFTPD |
| Gene Alias: | COLEC7 |
| Gene Description: | surfactant protein D |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "60(TCCTTTTTAAGC,-,0.00),62(CTTTTTAAGCCC,+,0.00)" |
