Difference between revisions of "TSS:Hg 105842.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=43 | |distance_to_tss=43 | ||
|end=80079089 | |end=80079089 | ||
| + | |end_of_center_position=80079066 | ||
|entrez_id=80195 | |entrez_id=80195 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=C10orf57 | + | |gene_alias=C10orf57 |
|gene_description=transmembrane protein 254 | |gene_description=transmembrane protein 254 | ||
|gene_id=80195 | |gene_id=80195 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=80079042 | |start=80079042 | ||
| + | |start_of_center_position=80079065 | ||
|strand=+ | |strand=+ | ||
|tata_box="-46(TCTTATATGGGG,+,0.00)" | |tata_box="-46(TCTTATATGGGG,+,0.00)" | ||
Revision as of 05:53, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 80079065 |
|---|---|
| End of the center position in the TSS region: | 80079066 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK309980 |
|---|---|
| Distance: | 0 |
| Num_trans: | 47 |
| All_trans: | AK309980:0 ENST00000372273.7:-7 uc057umm.1:-7 AL832483:-7 NM_001270369:-20 NM_001270368:-20 NM_001270367:-20 AK300490:-30 NM_001270374:156 NR_072987:156 NR_072985:156 NR_072984:156 NR_072986:156 ENST00000467529.5:181 uc001kbo.6:181 AL832397:181 ENST00000463029.5:184 uc001kbn.6:184 AK310160:191 AK311563:191 BX537803:192 ENST00000476173.5:206 uc031pwh.2:206 ENST00000483732.5:239 uc057umn.1:239 CR457310:-343 KJ894792:-345 ENST00000372274.5:-351 uc031pwd.2:-351 ENST00000372275.5:-361 uc031pwf.2:-361 ENST00000372281.7:-373 uc001kbl.5:-373 AK023325:-373 BC022252:-373 AK222536:-378 ENST00000372277.7:-397 ENST00000472622.5:-397 ENST00000613758.4:-397 NM_001270373:-397 NM_001270372:-397 NM_025125:-397 NM_001270371:-397 NM_001270370:-397 uc057umk.1:-397 uc057uml.1:-397 uc009xsn.5:-397 |
TATA-Box annotation
| Distance to TSS: | 43 |
|---|---|
| Nearest PromoterID: | NM_001270369 |
| Entrez ID: | 80195 |
| Nearest Unigene: | Hs.169982 |
| Nearest Refseq: | NM_025125 |
| Nearest Ensembl: | ENSG00000133678 |
| Gene Name: | transmembrane protein 254 |
| Gene Alias: | C10orf57 |
| Gene Description: | transmembrane protein 254 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-46(TCTTATATGGGG,+,0.00)" |
