Difference between revisions of "TSS:Hg 105843.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=27 | |distance_to_tss=27 | ||
|end=80079287 | |end=80079287 | ||
| + | |end_of_center_position=80079273 | ||
|entrez_id=80195 | |entrez_id=80195 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=C10orf57 | + | |gene_alias=C10orf57 |
|gene_description=transmembrane protein 254 | |gene_description=transmembrane protein 254 | ||
|gene_id=80195 | |gene_id=80195 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=80079257 | |start=80079257 | ||
| + | |start_of_center_position=80079272 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000467529.5 ENST00000463029.5 uc001kbo.6 uc001kbn.6 AL832397 AK310160 AK311563 BX537803 | |transcript_name=ENST00000467529.5 ENST00000463029.5 uc001kbo.6 uc001kbn.6 AL832397 AK310160 AK311563 BX537803 | ||
Revision as of 05:53, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 80079272 |
|---|---|
| End of the center position in the TSS region: | 80079273 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000467529.5 ENST00000463029.5 uc001kbo.6 uc001kbn.6 AL832397 AK310160 AK311563 BX537803 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENST00000467529.5:0 ENST00000463029.5:0 uc001kbo.6:0 uc001kbn.6:0 AL832397:0 AK310160:0 AK311563:0 BX537803:0 ENST00000476173.5:8 uc031pwh.2:8 NM_001270374:-13 NR_072987:-13 NR_072985:-13 NR_072984:-13 NR_072986:-13 ENST00000483732.5:41 uc057umn.1:41 AK309980:-210 ENST00000372273.7:-222 uc057umm.1:-222 AL832483:-222 NM_001270369:-235 NM_001270368:-235 NM_001270367:-235 AK300490:-245 |
TATA-Box annotation
| Distance to TSS: | 27 |
|---|---|
| Nearest PromoterID: | NR_072985 |
| Entrez ID: | 80195 |
| Nearest Unigene: | Hs.169982 |
| Nearest Refseq: | NM_025125 |
| Nearest Ensembl: | ENSG00000133678 |
| Gene Name: | transmembrane protein 254 |
| Gene Alias: | C10orf57 |
| Gene Description: | transmembrane protein 254 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
