Difference between revisions of "TSS:Hg 106037.1"
From referenceTSS
| Line 14: | Line 14: | ||
|distance_to_tss=150 | |distance_to_tss=150 | ||
|end=87863593 | |end=87863593 | ||
| + | |end_of_center_position=87863588 | ||
|entrez_id=5728 | |entrez_id=5728 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=10q23del | + | |gene_alias=10q23del |
|gene_description=phosphatase and tensin homolog | |gene_description=phosphatase and tensin homolog | ||
|gene_id=5728 | |gene_id=5728 | ||
| Line 32: | Line 33: | ||
|species=human | |species=human | ||
|start=87863582 | |start=87863582 | ||
| + | |start_of_center_position=87863587 | ||
|strand=+ | |strand=+ | ||
|tata_box="-18(CTCTTTATGCGC,+,0.00)" | |tata_box="-18(CTCTTTATGCGC,+,0.00)" | ||
Revision as of 06:21, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 87863587 |
|---|---|
| End of the center position in the TSS region: | 87863588 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC005821 |
|---|---|
| Distance: | 40 |
| Num_trans: | 10 |
| All_trans: | BC005821:40 U96180:86 ENST00000610634.1:-145 NM_000314:-145 NM_001304717:-145 NM_001304718:-145 uc057ush.1:-145 U92436:-145 ENST00000371953.7:-470 uc001kfb.4:-470 |
TATA-Box annotation
| Distance to TSS: | 150 |
|---|---|
| Nearest PromoterID: | NM_000314 |
| Entrez ID: | 5728 |
| Nearest Unigene: | Hs.500466 |
| Nearest Refseq: | NM_000314 |
| Nearest Ensembl: | ENSG00000171862 |
| Gene Name: | phosphatase and tensin homolog |
| Gene Alias: | 10q23del |
| Gene Description: | phosphatase and tensin homolog |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-18(CTCTTTATGCGC,+,0.00)" |
