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Difference between revisions of "TSS:Hg 106302.1"

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Line 8: Line 8:
 
|distance_to_tss=50
 
|distance_to_tss=50
 
|end=93894028
 
|end=93894028
 +
|end_of_center_position=93894020
 
|entrez_id=159371
 
|entrez_id=159371
 
|gc_percent=0.766169
 
|gc_percent=0.766169
|gene_alias=C10orf60|POST|TMEM20
+
|gene_alias=C10orf60
 
|gene_description=solute carrier family 35 member G1
 
|gene_description=solute carrier family 35 member G1
 
|gene_id=159371
 
|gene_id=159371
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=93894011
 
|start=93894011
 +
|start_of_center_position=93894019
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000603665.1 uc057uye.1 BC047102
 
|transcript_name=ENST00000603665.1 uc057uye.1 BC047102

Revision as of 07:01, 12 May 2019

Basic information about the TSS


TSS ID:hg_106302.1
Species:human
Chr:chr10
TSS Classification:yes
Start:93894011
End:93894028
Strand:+
TSS Score:1
Start of the center position in the TSS region:93894019
End of the center position in the TSS region:93894020



Gene and protein annotation


Transcript_name:ENST00000603665.1 uc057uye.1 BC047102
Distance:0
GeneID:159371
HGNC/MGI_ID:HGNC:26607
UniProt_ID:D3DR41
Gene_name:solute carrier family 35 member G1
Gene_symbol:SLC35G1
Gene_synonyms:C10orf60 FLJ33990
Gene_source:HGNC:26607



Transcript annotation


Transcript_name:ENST00000603665.1 uc057uye.1 BC047102
Distance:0
Num_trans:22
All_trans:ENST00000603665.1:0 uc057uye.1:0 BC047102:0 KJ895710:6 BC104814:-8 ENST00000494992.5:-10 uc057uyd.1:-10 BC143283:-10 BC143284:-10 ENST00000605679.5:-11 uc057uyc.1:-11 BC058549:-11 ENST00000483386.5:-21 uc001kjj.4:-21 BC036382:-21 ENST00000427197.1:-39 ENST00000371408.7:-39 NM_001134658:-39 NM_153226:-39 uc001kjg.3:-39 uc001kjf.3:-39 AK091309:-39



TATA-Box annotation


Distance to TSS:50
Nearest PromoterID:NM_001134658
Entrez ID:159371
Nearest Unigene:Hs.632085
Nearest Refseq:NM_153226
Nearest Ensembl:ENSG00000176273
Gene Name:solute carrier family 35 member G1
Gene Alias:C10orf60
Gene Description:solute carrier family 35 member G1
Gene Type:protein-coding
CpG%:0.14
GC%:0.766169
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):