Difference between revisions of "TSS:Mm 99222.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK192645:32 AK196696:32 AK198740:32 AK201730:32 AK212677:51 |chr=chr11 |cpg_percent=0.02 |distance=32 |distance_to_tss=6395 |end=101036748 |entrez_id=10...") |
|||
| Line 6: | Line 6: | ||
|distance_to_tss=6395 | |distance_to_tss=6395 | ||
|end=101036748 | |end=101036748 | ||
| + | |end_of_center_position=101036735 | ||
|entrez_id=102466767 | |entrez_id=102466767 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=Gm27728 | + | |gene_alias=Gm27728 |
|gene_description=microRNA 6928 | |gene_description=microRNA 6928 | ||
|gene_id=11975 | |gene_id=11975 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:103286 | |hgnc_mgi_id=MGI:103286 | ||
| + | |mmu-mir-6928= | ||
|nearest_ensembl=ENSMUSG00000098415 | |nearest_ensembl=ENSMUSG00000098415 | ||
|nearest_promoter_id=NR_105893 | |nearest_promoter_id=NR_105893 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=101036721 | |start=101036721 | ||
| + | |start_of_center_position=101036734 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK192645 AK196696 AK198740 AK201730 | |transcript_name=AK192645 AK196696 AK198740 AK201730 | ||
Revision as of 09:47, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101036734 |
|---|---|
| End of the center position in the TSS region: | 101036735 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK192645 AK196696 AK198740 AK201730 |
|---|---|
| Distance: | 32 |
| Num_trans: | 5 |
| All_trans: | AK192645:32 AK196696:32 AK198740:32 AK201730:32 AK212677:51 |
TATA-Box annotation
| Distance to TSS: | 6395 |
|---|---|
| Nearest PromoterID: | NR_105893 |
| Entrez ID: | 102466767 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_105893 |
| Nearest Ensembl: | ENSMUSG00000098415 |
| Gene Name: | "ATPase, H+ transporting, lysosomal V0 subunit A1" |
| Gene Alias: | Gm27728 |
| Gene Description: | microRNA 6928 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
