Personal tools

Difference between revisions of "TSS:Mm 99236.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=NM_013792:0 uc007lna.2:0 AK143546:0 AK170758:0 AK158045:0 AK164125:0 BC055733:0 U85247:4 AK198468:12 AK044668:42 ENSMUST00000001802.9:-70 uc007lmz.2:-20...")
 
Line 6: Line 6:
 
|distance_to_tss=7
 
|distance_to_tss=7
 
|end=101070121
 
|end=101070121
 +
|end_of_center_position=101070102
 
|entrez_id=27419
 
|entrez_id=27419
 
|gc_percent=0.686567
 
|gc_percent=0.686567
Line 24: Line 25:
 
|species=mouse
 
|species=mouse
 
|start=101070081
 
|start=101070081
 +
|start_of_center_position=101070101
 
|strand=+
 
|strand=+
 
|transcript_name=NM_013792 uc007lna.2 AK143546 AK170758 AK158045 AK164125 BC055733
 
|transcript_name=NM_013792 uc007lna.2 AK143546 AK170758 AK158045 AK164125 BC055733

Revision as of 09:48, 12 May 2019

Basic information about the TSS


TSS ID:mm_99236.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101070081
End:101070121
Strand:+
TSS Score:1
Start of the center position in the TSS region:101070101
End of the center position in the TSS region:101070102



Gene and protein annotation


Transcript_name:NM_013792 uc007lna.2 AK143546 AK170758 AK158045 AK164125 BC055733
Distance:0
GeneID:27419
HGNC/MGI_ID:MGI:1351641
UniProt_ID:O88325
Gene_name:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
Gene_symbol:Naglu
Gene_synonyms:
Gene_source:MGI:1351641



Transcript annotation


Transcript_name:NM_013792 uc007lna.2 AK143546 AK170758 AK158045 AK164125 BC055733
Distance:0
Num_trans:14
All_trans:NM_013792:0 uc007lna.2:0 AK143546:0 AK170758:0 AK158045:0 AK164125:0 BC055733:0 U85247:4 AK198468:12 AK044668:42 ENSMUST00000001802.9:-70 uc007lmz.2:-205 AK158774:-205 AK191264:342



TATA-Box annotation


Distance to TSS:7
Nearest PromoterID:NM_013792
Entrez ID:27419
Nearest Unigene:Mm.95452
Nearest Refseq:NM_013792
Nearest Ensembl:ENSMUSG00000001751
Gene Name:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
Gene Alias:-
Gene Description:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
Gene Type:protein-coding
CpG%:0.075
GC%:0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):