Difference between revisions of "TSS:Mm 99252.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_134024:0 uc007lnk.1:0 AK160125:0 BC006581:0 AK192509:3 AK183189:3 AK154019:6 AB158480:7 AK196283:75 ENSMUST00000043680.8:-170 |chr=chr11 |cpg_percent...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AI451582= | ||
| + | |AI503389= | ||
| + | |Tubg= | ||
|all_trans=NM_134024:0 uc007lnk.1:0 AK160125:0 BC006581:0 AK192509:3 AK183189:3 AK154019:6 AB158480:7 AK196283:75 ENSMUST00000043680.8:-170 | |all_trans=NM_134024:0 uc007lnk.1:0 AK160125:0 BC006581:0 AK192509:3 AK183189:3 AK154019:6 AB158480:7 AK196283:75 ENSMUST00000043680.8:-170 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=1 | |distance_to_tss=1 | ||
|end=101120157 | |end=101120157 | ||
| + | |end_of_center_position=101120133 | ||
|entrez_id=103733 | |entrez_id=103733 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=1500010O08Rik | + | |gene_alias=1500010O08Rik |
|gene_description="tubulin, gamma 1" | |gene_description="tubulin, gamma 1" | ||
|gene_id=103733 | |gene_id=103733 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=101120107 | |start=101120107 | ||
| + | |start_of_center_position=101120132 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_134024 uc007lnk.1 AK160125 BC006581 | |transcript_name=NM_134024 uc007lnk.1 AK160125 BC006581 | ||
Revision as of 09:49, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 101120132 |
|---|---|
| End of the center position in the TSS region: | 101120133 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_134024 uc007lnk.1 AK160125 BC006581 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | NM_134024:0 uc007lnk.1:0 AK160125:0 BC006581:0 AK192509:3 AK183189:3 AK154019:6 AB158480:7 AK196283:75 ENSMUST00000043680.8:-170 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_134024 |
| Entrez ID: | 103733 |
| Nearest Unigene: | Mm.479145 |
| Nearest Refseq: | NM_134024 |
| Nearest Ensembl: | ENSMUSG00000035198 |
| Gene Name: | "tubulin, gamma 1" |
| Gene Alias: | 1500010O08Rik |
| Gene Description: | "tubulin, gamma 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
