Difference between revisions of "TSS:Mm 99253.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK192509:0 AK183189:0 AK154019:0 AB158480:0 NM_134024:-28 uc007lnk.1:-28 BC006581:-28 AK160125:-40 AK196283:59 ENSMUST00000043680.8:-221 |chr=chr11 |cpg...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AI451582= | ||
| + | |AI503389= | ||
| + | |Tubg= | ||
|all_trans=AK192509:0 AK183189:0 AK154019:0 AB158480:0 NM_134024:-28 uc007lnk.1:-28 BC006581:-28 AK160125:-40 AK196283:59 ENSMUST00000043680.8:-221 | |all_trans=AK192509:0 AK183189:0 AK154019:0 AB158480:0 NM_134024:-28 uc007lnk.1:-28 BC006581:-28 AK160125:-40 AK196283:59 ENSMUST00000043680.8:-221 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=35 | |distance_to_tss=35 | ||
|end=101120173 | |end=101120173 | ||
| + | |end_of_center_position=101120166 | ||
|entrez_id=103733 | |entrez_id=103733 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=1500010O08Rik | + | |gene_alias=1500010O08Rik |
|gene_description="tubulin, gamma 1" | |gene_description="tubulin, gamma 1" | ||
|gene_id=103733 | |gene_id=103733 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=101120158 | |start=101120158 | ||
| + | |start_of_center_position=101120165 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK192509 AK183189 AK154019 AB158480 | |transcript_name=AK192509 AK183189 AK154019 AB158480 | ||
Revision as of 09:49, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 101120165 |
|---|---|
| End of the center position in the TSS region: | 101120166 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK192509 AK183189 AK154019 AB158480 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | AK192509:0 AK183189:0 AK154019:0 AB158480:0 NM_134024:-28 uc007lnk.1:-28 BC006581:-28 AK160125:-40 AK196283:59 ENSMUST00000043680.8:-221 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_134024 |
| Entrez ID: | 103733 |
| Nearest Unigene: | Mm.479145 |
| Nearest Refseq: | NM_134024 |
| Nearest Ensembl: | ENSMUSG00000035198 |
| Gene Name: | "tubulin, gamma 1" |
| Gene Alias: | 1500010O08Rik |
| Gene Description: | "tubulin, gamma 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
