Difference between revisions of "TSS:Hg 184191.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000375114.7:0 NM_007367:0 NM_016732:0 uc002xac.4:0 ENST00000448364.5:24 uc061whx.1:24 ENST00000246194.7:66 uc002xab.4:66 AK226085:97 ENST000004132...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |P542= | ||
|all_trans=ENST00000375114.7:0 NM_007367:0 NM_016732:0 uc002xac.4:0 ENST00000448364.5:24 uc061whx.1:24 ENST00000246194.7:66 uc002xab.4:66 AK226085:97 ENST00000413297.5:146 uc061why.1:146 BC103753:249 AK299766:255 AF148457:270 ENST00000333552.9:297 uc061whz.1:297 AK222915:310 L38696:392 BC105018:401 AK291079:419 AK291054:425 | |all_trans=ENST00000375114.7:0 NM_007367:0 NM_016732:0 uc002xac.4:0 ENST00000448364.5:24 uc061whx.1:24 ENST00000246194.7:66 uc002xab.4:66 AK226085:97 ENST00000413297.5:146 uc061why.1:146 BC103753:249 AK299766:255 AF148457:270 ENST00000333552.9:297 uc061whz.1:297 AK222915:310 L38696:392 BC105018:401 AK291079:419 AK291054:425 | ||
|chr=chr20 | |chr=chr20 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-1 | |distance_to_tss=-1 | ||
|end=33993656 | |end=33993656 | ||
| + | |end_of_center_position=33993651 | ||
|entrez_id=22913 | |entrez_id=22913 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=HNRPCL2 | + | |gene_alias=HNRPCL2 |
|gene_description=RALY heterogeneous nuclear ribonucleoprotein | |gene_description=RALY heterogeneous nuclear ribonucleoprotein | ||
|gene_id=22913 | |gene_id=22913 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=33993645 | |start=33993645 | ||
| + | |start_of_center_position=33993650 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000375114.7 NM_007367 NM_016732 uc002xac.4 | |transcript_name=ENST00000375114.7 NM_007367 NM_016732 uc002xac.4 | ||
Revision as of 09:52, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33993650 |
|---|---|
| End of the center position in the TSS region: | 33993651 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375114.7 NM_007367 NM_016732 uc002xac.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000375114.7:0 NM_007367:0 NM_016732:0 uc002xac.4:0 ENST00000448364.5:24 uc061whx.1:24 ENST00000246194.7:66 uc002xab.4:66 AK226085:97 ENST00000413297.5:146 uc061why.1:146 BC103753:249 AK299766:255 AF148457:270 ENST00000333552.9:297 uc061whz.1:297 AK222915:310 L38696:392 BC105018:401 AK291079:419 AK291054:425 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_016732 |
| Entrez ID: | 22913 |
| Nearest Unigene: | Hs.136947 |
| Nearest Refseq: | NM_007367 |
| Nearest Ensembl: | ENSG00000125970 |
| Gene Name: | RALY heterogeneous nuclear ribonucleoprotein |
| Gene Alias: | HNRPCL2 |
| Gene Description: | RALY heterogeneous nuclear ribonucleoprotein |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
