Difference between revisions of "TSS:Mm 99294.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AF115411:-88 BC080857:-97 ENSMUST00000017316.6:195 uc007loq.1:195 AK040729:195 NM_009675:-258 uc007lop.2:-258 ENSMUST00000103105.9:-259 AF054831:-259 |c...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |VAP1= | ||
|all_trans=AF115411:-88 BC080857:-97 ENSMUST00000017316.6:195 uc007loq.1:195 AK040729:195 NM_009675:-258 uc007lop.2:-258 ENSMUST00000103105.9:-259 AF054831:-259 | |all_trans=AF115411:-88 BC080857:-97 ENSMUST00000017316.6:195 uc007loq.1:195 AK040729:195 NM_009675:-258 uc007lop.2:-258 ENSMUST00000103105.9:-259 AF054831:-259 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=263 | |distance_to_tss=263 | ||
|end=101330874 | |end=101330874 | ||
| + | |end_of_center_position=101330869 | ||
|entrez_id=11754 | |entrez_id=11754 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=SSAO | + | |gene_alias=SSAO |
|gene_description="amine oxidase, copper containing 3" | |gene_description="amine oxidase, copper containing 3" | ||
|gene_id=11754 | |gene_id=11754 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=101330863 | |start=101330863 | ||
| + | |start_of_center_position=101330868 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AF115411 | |transcript_name=AF115411 | ||
Revision as of 09:54, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101330868 |
|---|---|
| End of the center position in the TSS region: | 101330869 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF115411 |
|---|---|
| Distance: | -88 |
| Num_trans: | 9 |
| All_trans: | AF115411:-88 BC080857:-97 ENSMUST00000017316.6:195 uc007loq.1:195 AK040729:195 NM_009675:-258 uc007lop.2:-258 ENSMUST00000103105.9:-259 AF054831:-259 |
TATA-Box annotation
| Distance to TSS: | 263 |
|---|---|
| Nearest PromoterID: | NM_009675 |
| Entrez ID: | 11754 |
| Nearest Unigene: | Mm.67281 |
| Nearest Refseq: | NM_009675 |
| Nearest Ensembl: | ENSMUSG00000019326 |
| Gene Name: | "amine oxidase, copper containing 3" |
| Gene Alias: | SSAO |
| Gene Description: | "amine oxidase, copper containing 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
