Difference between revisions of "TSS:Mm 99319.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000139939.1:0 AF214527:0 AK132027:0 AK146291:0 AK008120:0 AK012566:0 AK010627:0 AK002945:0 BC024366:0 BC082284:0 AK088211:0 BC090395:2 ENSMUST0...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=181 | |distance_to_tss=181 | ||
|end=101442439 | |end=101442439 | ||
| + | |end_of_center_position=101442426 | ||
|entrez_id=19942 | |entrez_id=19942 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=101442412 | |start=101442412 | ||
| + | |start_of_center_position=101442425 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000139939.1 AF214527 AK132027 AK146291 AK008120 AK012566 AK010627 AK002945 BC024366 BC082284 AK088211 | |transcript_name=ENSMUST00000139939.1 AF214527 AK132027 AK146291 AK008120 AK012566 AK010627 AK002945 BC024366 BC082284 AK088211 | ||
Revision as of 09:56, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 101442425 |
|---|---|
| End of the center position in the TSS region: | 101442426 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000139939.1 AF214527 AK132027 AK146291 AK008120 AK012566 AK010627 AK002945 BC024366 BC082284 AK088211 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENSMUST00000139939.1:0 AF214527:0 AK132027:0 AK146291:0 AK008120:0 AK012566:0 AK010627:0 AK002945:0 BC024366:0 BC082284:0 AK088211:0 BC090395:2 ENSMUST00000107249.7:7 ENSMUST00000077856.12:-115 NM_011289:-168 uc007low.2:-168 |
TATA-Box annotation
| Distance to TSS: | 181 |
|---|---|
| Nearest PromoterID: | NM_011289 |
| Entrez ID: | 19942 |
| Nearest Unigene: | Mm.340658 |
| Nearest Refseq: | NM_011289 |
| Nearest Ensembl: | ENSMUSG00000063316 |
| Gene Name: | ribosomal protein L27 |
| Gene Alias: | - |
| Gene Description: | ribosomal protein L27 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
