Difference between revisions of "TSS:Mm 99337.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000001347.6:-26 BC139330:30 BC139331:30 NM_009708:103 uc007lpb.1:103 BC107022:103 BC128475:104 BC127034:109 AF016482:120 |chr=chr11 |cpg_percen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Rohn= | ||
|all_trans=ENSMUST00000001347.6:-26 BC139330:30 BC139331:30 NM_009708:103 uc007lpb.1:103 BC107022:103 BC128475:104 BC127034:109 AF016482:120 | |all_trans=ENSMUST00000001347.6:-26 BC139330:30 BC139331:30 NM_009708:103 uc007lpb.1:103 BC107022:103 BC128475:104 BC127034:109 AF016482:120 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-120 | |distance_to_tss=-120 | ||
|end=101468235 | |end=101468235 | ||
| + | |end_of_center_position=101468218 | ||
|entrez_id=11858 | |entrez_id=11858 | ||
|gc_percent=0.840796 | |gc_percent=0.840796 | ||
| − | |gene_alias=Arhn | + | |gene_alias=Arhn |
|gene_description=Rho family GTPase 2 | |gene_description=Rho family GTPase 2 | ||
|gene_id=11858 | |gene_id=11858 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=101468200 | |start=101468200 | ||
| + | |start_of_center_position=101468217 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000001347.6 | |transcript_name=ENSMUST00000001347.6 | ||
Revision as of 09:59, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 101468217 |
|---|---|
| End of the center position in the TSS region: | 101468218 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000001347.6 |
|---|---|
| Distance: | -26 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000001347.6:-26 BC139330:30 BC139331:30 NM_009708:103 uc007lpb.1:103 BC107022:103 BC128475:104 BC127034:109 AF016482:120 |
TATA-Box annotation
| Distance to TSS: | -120 |
|---|---|
| Nearest PromoterID: | NM_009708 |
| Entrez ID: | 11858 |
| Nearest Unigene: | Mm.378883 |
| Nearest Refseq: | NM_009708 |
| Nearest Ensembl: | ENSMUSG00000001313 |
| Gene Name: | Rho family GTPase 2 |
| Gene Alias: | Arhn |
| Gene Description: | Rho family GTPase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
