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Difference between revisions of "TSS:Mm 99338.1"

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(Created page with "{{TSSDetail |all_trans=BC139330:16 BC139331:16 ENSMUST00000001347.6:-62 NM_009708:89 uc007lpb.1:89 BC107022:89 BC128475:90 BC127034:95 AF016482:106 |chr=chr11 |cpg_percent=0.1...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|Rohn=
 
|all_trans=BC139330:16 BC139331:16 ENSMUST00000001347.6:-62 NM_009708:89 uc007lpb.1:89 BC107022:89 BC128475:90 BC127034:95 AF016482:106
 
|all_trans=BC139330:16 BC139331:16 ENSMUST00000001347.6:-62 NM_009708:89 uc007lpb.1:89 BC107022:89 BC128475:90 BC127034:95 AF016482:106
 
|chr=chr11
 
|chr=chr11
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|distance_to_tss=-95
 
|distance_to_tss=-95
 
|end=101468249
 
|end=101468249
 +
|end_of_center_position=101468243
 
|entrez_id=11858
 
|entrez_id=11858
 
|gc_percent=0.830846
 
|gc_percent=0.830846
|gene_alias=Arhn|Rohn
+
|gene_alias=Arhn
 
|gene_description=Rho family GTPase 2
 
|gene_description=Rho family GTPase 2
 
|gene_id=11858
 
|gene_id=11858
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|species=mouse
 
|species=mouse
 
|start=101468236
 
|start=101468236
 +
|start_of_center_position=101468242
 
|strand=+
 
|strand=+
 
|transcript_name=BC139330 BC139331
 
|transcript_name=BC139330 BC139331

Revision as of 09:59, 12 May 2019

Basic information about the TSS


TSS ID:mm_99338.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101468236
End:101468249
Strand:+
TSS Score:1
Start of the center position in the TSS region:101468242
End of the center position in the TSS region:101468243



Gene and protein annotation


Transcript_name:BC139330 BC139331
Distance:16
GeneID:11858
HGNC/MGI_ID:MGI:1338755
UniProt_ID:
Gene_name:Rho family GTPase 2
Gene_symbol:Rnd2
Gene_synonyms:Arhn Rohn
Gene_source:MGI:1338755



Transcript annotation


Transcript_name:BC139330 BC139331
Distance:16
Num_trans:9
All_trans:BC139330:16 BC139331:16 ENSMUST00000001347.6:-62 NM_009708:89 uc007lpb.1:89 BC107022:89 BC128475:90 BC127034:95 AF016482:106



TATA-Box annotation


Distance to TSS:-95
Nearest PromoterID:NM_009708
Entrez ID:11858
Nearest Unigene:Mm.378883
Nearest Refseq:NM_009708
Nearest Ensembl:ENSMUSG00000001313
Gene Name:Rho family GTPase 2
Gene Alias:Arhn
Gene Description:Rho family GTPase 2
Gene Type:protein-coding
CpG%:0.145
GC%:0.830846
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):