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Difference between revisions of "TSS:Mm 99347.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000039581.13:0 ENSMUST00000100403.8:0 ENSMUST00000143045.7:0 ENSMUST00000107194.7:0 ENSMUST00000128614.1:0 NM_144830:0 uc007lpl.1:0 uc007lpm.1:...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|AI043106=
 +
|BC022145=
 
|all_trans=ENSMUST00000039581.13:0 ENSMUST00000100403.8:0 ENSMUST00000143045.7:0 ENSMUST00000107194.7:0 ENSMUST00000128614.1:0 NM_144830:0 uc007lpl.1:0 uc007lpm.1:0 uc007lpn.1:0 AK146019:0 AK154217:0 AK150285:0 AK152741:0 AK151842:0 BC033268:0 AK170900:0 AK172282:0 AK149650:0 AK168437:0 AK169081:0 BC022145:189
 
|all_trans=ENSMUST00000039581.13:0 ENSMUST00000100403.8:0 ENSMUST00000143045.7:0 ENSMUST00000107194.7:0 ENSMUST00000128614.1:0 NM_144830:0 uc007lpl.1:0 uc007lpm.1:0 uc007lpn.1:0 AK146019:0 AK154217:0 AK150285:0 AK152741:0 AK151842:0 BC033268:0 AK170900:0 AK172282:0 AK149650:0 AK168437:0 AK169081:0 BC022145:189
 
|chr=chr11
 
|chr=chr11
Line 6: Line 8:
 
|distance_to_tss=32
 
|distance_to_tss=32
 
|end=101582312
 
|end=101582312
 +
|end_of_center_position=101582275
 
|entrez_id=217203
 
|entrez_id=217203
 
|gc_percent=0.606965
 
|gc_percent=0.606965
−
|gene_alias=0610008L10Rik|AI043106|BC022145
+
|gene_alias=0610008L10Rik
 
|gene_description=transmembrane protein 106A
 
|gene_description=transmembrane protein 106A
 
|gene_id=217203
 
|gene_id=217203
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|species=mouse
 
|species=mouse
 
|start=101582236
 
|start=101582236
 +
|start_of_center_position=101582274
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000039581.13 ENSMUST00000100403.8 ENSMUST00000143045.7 ENSMUST00000107194.7 ENSMUST00000128614.1 NM_144830 uc007lpl.1 uc007lpm.1 uc007lpn.1 AK146019 AK154217 AK150285 AK152741 AK151842 BC033268 AK170900 AK172282 AK149650 AK168437 AK169081
 
|transcript_name=ENSMUST00000039581.13 ENSMUST00000100403.8 ENSMUST00000143045.7 ENSMUST00000107194.7 ENSMUST00000128614.1 NM_144830 uc007lpl.1 uc007lpm.1 uc007lpn.1 AK146019 AK154217 AK150285 AK152741 AK151842 BC033268 AK170900 AK172282 AK149650 AK168437 AK169081

Revision as of 10:00, 12 May 2019

Basic information about the TSS

TSS ID:mm_99347.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101582236
End:101582312
Strand:+
TSS Score:1
Start of the center position in the TSS region:101582274
End of the center position in the TSS region:101582275



Gene and protein annotation

Transcript_name:ENSMUST00000039581.13 ENSMUST00000100403.8 ENSMUST00000143045.7 ENSMUST00000107194.7 ENSMUST00000128614.1 NM_144830 uc007lpl.1 uc007lpm.1 uc007lpn.1 AK146019 AK154217 AK150285 AK152741 AK151842 BC033268 AK170900 AK172282 AK149650 AK168437 AK169081
Distance:0
GeneID:217203
HGNC/MGI_ID:MGI:1922056
UniProt_ID:A2A4M9 A2A4N0 Q8VC04
Gene_name:transmembrane protein 106A
Gene_symbol:Tmem106a
Gene_synonyms:0610008L10Rik
Gene_source:MGI:1922056



Transcript annotation

Transcript_name:ENSMUST00000039581.13 ENSMUST00000100403.8 ENSMUST00000143045.7 ENSMUST00000107194.7 ENSMUST00000128614.1 NM_144830 uc007lpl.1 uc007lpm.1 uc007lpn.1 AK146019 AK154217 AK150285 AK152741 AK151842 BC033268 AK170900 AK172282 AK149650 AK168437 AK169081
Distance:0
Num_trans:21
All_trans:ENSMUST00000039581.13:0 ENSMUST00000100403.8:0 ENSMUST00000143045.7:0 ENSMUST00000107194.7:0 ENSMUST00000128614.1:0 NM_144830:0 uc007lpl.1:0 uc007lpm.1:0 uc007lpn.1:0 AK146019:0 AK154217:0 AK150285:0 AK152741:0 AK151842:0 BC033268:0 AK170900:0 AK172282:0 AK149650:0 AK168437:0 AK169081:0 BC022145:189



TATA-Box annotation

Distance to TSS:32
Nearest PromoterID:NM_144830
Entrez ID:217203
Nearest Unigene:Mm.280559
Nearest Refseq:NM_144830
Nearest Ensembl:ENSMUSG00000034947
Gene Name:transmembrane protein 106A
Gene Alias:0610008L10Rik
Gene Description:transmembrane protein 106A
Gene Type:protein-coding
CpG%:0.065
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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