Difference between revisions of "TSS:Mm 99367.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000156842.1:0 AK172600:0 AK078552:0 AK142226:0 BC065064:0 AK170616:0 ENSMUST00000129741.1:1 AK220485:-15 BC132445:-40 NM_144831:-56 uc007lpr.1:...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=70 | |distance_to_tss=70 | ||
|end=101733040 | |end=101733040 | ||
| + | |end_of_center_position=101733026 | ||
|entrez_id=217207 | |entrez_id=217207 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=Ddx8 | + | |gene_alias=Ddx8 |
|gene_description=DEAH (Asp-Glu-Ala-His) box polypeptide 8 | |gene_description=DEAH (Asp-Glu-Ala-His) box polypeptide 8 | ||
|gene_id=217207 | |gene_id=217207 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1306823 | |hgnc_mgi_id=MGI:1306823 | ||
| + | |mDEAH6= | ||
| + | |mKIAA4096= | ||
|nearest_ensembl=ENSMUSG00000034931 | |nearest_ensembl=ENSMUSG00000034931 | ||
|nearest_promoter_id=NM_144831 | |nearest_promoter_id=NM_144831 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=101733011 | |start=101733011 | ||
| + | |start_of_center_position=101733025 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000156842.1 AK172600 AK078552 AK142226 BC065064 AK170616 | |transcript_name=ENSMUST00000156842.1 AK172600 AK078552 AK142226 BC065064 AK170616 | ||
Revision as of 10:02, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 101733025 |
|---|---|
| End of the center position in the TSS region: | 101733026 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000156842.1 AK172600 AK078552 AK142226 BC065064 AK170616 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENSMUST00000156842.1:0 AK172600:0 AK078552:0 AK142226:0 BC065064:0 AK170616:0 ENSMUST00000129741.1:1 AK220485:-15 BC132445:-40 NM_144831:-56 uc007lpr.1:-56 AK153829:-56 ENSMUST00000039152.13:-62 ENSMUST00000125409.1:-93 |
TATA-Box annotation
| Distance to TSS: | 70 |
|---|---|
| Nearest PromoterID: | NM_144831 |
| Entrez ID: | 217207 |
| Nearest Unigene: | Mm.28186 |
| Nearest Refseq: | NM_144831 |
| Nearest Ensembl: | ENSMUSG00000034931 |
| Gene Name: | DEAH (Asp-Glu-Ala-His) box polypeptide 8 |
| Gene Alias: | Ddx8 |
| Gene Description: | DEAH (Asp-Glu-Ala-His) box polypeptide 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
