Difference between revisions of "TSS:Mm 50236.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK204916:172 DQ693662:193 AK176971:297 AK192670:-353 AK184760:391 |chr=chr6 |cpg_percent=0.015 |distance=172 |distance_to_tss=1476 |end=42351311 |entrez...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |R75157= | ||
|all_trans=AK204916:172 DQ693662:193 AK176971:297 AK192670:-353 AK184760:391 | |all_trans=AK204916:172 DQ693662:193 AK176971:297 AK192670:-353 AK184760:391 | ||
|chr=chr6 | |chr=chr6 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=1476 | |distance_to_tss=1476 | ||
|end=42351311 | |end=42351311 | ||
| + | |end_of_center_position=42351304 | ||
|entrez_id=22793 | |entrez_id=22793 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=9530098H06Rik | + | |gene_alias=9530098H06Rik |
|gene_description=zyxin | |gene_description=zyxin | ||
|gene_id=22793 | |gene_id=22793 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=42351296 | |start=42351296 | ||
| + | |start_of_center_position=42351303 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK204916 | |transcript_name=AK204916 | ||
Revision as of 10:03, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 42351303 |
|---|---|
| End of the center position in the TSS region: | 42351304 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK204916 |
|---|---|
| Distance: | 172 |
| Num_trans: | 5 |
| All_trans: | AK204916:172 DQ693662:193 AK176971:297 AK192670:-353 AK184760:391 |
TATA-Box annotation
| Distance to TSS: | 1476 |
|---|---|
| Nearest PromoterID: | NM_001289619 |
| Entrez ID: | 22793 |
| Nearest Unigene: | Mm.282303 |
| Nearest Refseq: | NM_011777 |
| Nearest Ensembl: | ENSMUSG00000029860 |
| Gene Name: | zyxin |
| Gene Alias: | 9530098H06Rik |
| Gene Description: | zyxin |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
