Difference between revisions of "TSS:Mm 99374.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000175972.1:-8 ENSMUST00000176722.7:-13 |chr=chr11 |cpg_percent=0.045 |distance=-8 |distance_to_tss=494 |end=101984303 |entrez_id=72349 |gc_per...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |5031436O03Rik= | ||
| + | |T-DSP11= | ||
| + | |VHR= | ||
|all_trans=ENSMUST00000175972.1:-8 ENSMUST00000176722.7:-13 | |all_trans=ENSMUST00000175972.1:-8 ENSMUST00000176722.7:-13 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=494 | |distance_to_tss=494 | ||
|end=101984303 | |end=101984303 | ||
| + | |end_of_center_position=101984298 | ||
|entrez_id=72349 | |entrez_id=72349 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=2210015O03Rik | + | |gene_alias=2210015O03Rik |
|gene_description=dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) | |gene_description=dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) | ||
|gene_id=75437 | |gene_id=75437 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=101984291 | |start=101984291 | ||
| + | |start_of_center_position=101984297 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000175972.1 | |transcript_name=ENSMUST00000175972.1 | ||
Revision as of 10:04, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 101984297 |
|---|---|
| End of the center position in the TSS region: | 101984298 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000175972.1 |
|---|---|
| Distance: | -8 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000175972.1:-8 ENSMUST00000176722.7:-13 |
TATA-Box annotation
| Distance to TSS: | 494 |
|---|---|
| Nearest PromoterID: | NM_028207 |
| Entrez ID: | 72349 |
| Nearest Unigene: | Mm.196295 |
| Nearest Refseq: | NM_028207 |
| Nearest Ensembl: | ENSMUSG00000003518 |
| Gene Name: | RIKEN cDNA 1700006E09 gene |
| Gene Alias: | 2210015O03Rik |
| Gene Description: | dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
