Difference between revisions of "TSS:Mm 99400.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000139995.1:0 AK165395:13 AY186239:19 ENSMUST00000131382.7:-56 NM_175935:-112 uc007lqt.2:-112 BC069959:-112 ENSMUST00000078975.7:-142 ENSMUST00...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AU019276= | ||
| + | |AU045429= | ||
| + | |AV128920= | ||
| + | |AW545836= | ||
| + | |UGRP= | ||
|all_trans=ENSMUST00000139995.1:0 AK165395:13 AY186239:19 ENSMUST00000131382.7:-56 NM_175935:-112 uc007lqt.2:-112 BC069959:-112 ENSMUST00000078975.7:-142 ENSMUST00000070334.9:-191 AK002966:-191 | |all_trans=ENSMUST00000139995.1:0 AK165395:13 AY186239:19 ENSMUST00000131382.7:-56 NM_175935:-112 uc007lqt.2:-112 BC069959:-112 ENSMUST00000078975.7:-142 ENSMUST00000070334.9:-191 AK002966:-191 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=123 | |distance_to_tss=123 | ||
|end=102189833 | |end=102189833 | ||
| + | |end_of_center_position=102189822 | ||
|entrez_id=68401 | |entrez_id=68401 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=0710001K01Rik | + | |gene_alias=0710001K01Rik |
|gene_description="glucose 6 phosphatase, catalytic, 3" | |gene_description="glucose 6 phosphatase, catalytic, 3" | ||
|gene_id=68401 | |gene_id=68401 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=102189810 | |start=102189810 | ||
| + | |start_of_center_position=102189821 | ||
|strand=+ | |strand=+ | ||
|tata_box="-7(GGCTAGAAAGGG,-,0.00)" | |tata_box="-7(GGCTAGAAAGGG,-,0.00)" | ||
Revision as of 10:09, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102189821 |
|---|---|
| End of the center position in the TSS region: | 102189822 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000139995.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000139995.1:0 AK165395:13 AY186239:19 ENSMUST00000131382.7:-56 NM_175935:-112 uc007lqt.2:-112 BC069959:-112 ENSMUST00000078975.7:-142 ENSMUST00000070334.9:-191 AK002966:-191 |
TATA-Box annotation
| Distance to TSS: | 123 |
|---|---|
| Nearest PromoterID: | NM_175935 |
| Entrez ID: | 68401 |
| Nearest Unigene: | Mm.22385 |
| Nearest Refseq: | NM_175935 |
| Nearest Ensembl: | ENSMUSG00000034793 |
| Gene Name: | "glucose 6 phosphatase, catalytic, 3" |
| Gene Alias: | 0710001K01Rik |
| Gene Description: | "glucose 6 phosphatase, catalytic, 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-7(GGCTAGAAAGGG,-,0.00)" |
