Difference between revisions of "TSS:Mm 99401.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK165395:0 AY186239:0 ENSMUST00000139995.1:-15 ENSMUST00000131382.7:-86 NM_175935:-142 uc007lqt.2:-142 BC069959:-142 ENSMUST00000078975.7:-172 ENSMUST00...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AU019276= | ||
| + | |AU045429= | ||
| + | |AV128920= | ||
| + | |AW545836= | ||
| + | |UGRP= | ||
|all_trans=AK165395:0 AY186239:0 ENSMUST00000139995.1:-15 ENSMUST00000131382.7:-86 NM_175935:-142 uc007lqt.2:-142 BC069959:-142 ENSMUST00000078975.7:-172 ENSMUST00000070334.9:-221 AK002966:-221 | |all_trans=AK165395:0 AY186239:0 ENSMUST00000139995.1:-15 ENSMUST00000131382.7:-86 NM_175935:-142 uc007lqt.2:-142 BC069959:-142 ENSMUST00000078975.7:-172 ENSMUST00000070334.9:-221 AK002966:-221 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=156 | |distance_to_tss=156 | ||
|end=102189870 | |end=102189870 | ||
| + | |end_of_center_position=102189856 | ||
|entrez_id=68401 | |entrez_id=68401 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=0710001K01Rik | + | |gene_alias=0710001K01Rik |
|gene_description="glucose 6 phosphatase, catalytic, 3" | |gene_description="glucose 6 phosphatase, catalytic, 3" | ||
|gene_id=68401 | |gene_id=68401 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=102189840 | |start=102189840 | ||
| + | |start_of_center_position=102189855 | ||
|strand=+ | |strand=+ | ||
|tata_box="-40(GGCTAGAAAGGG,-,0.00)" | |tata_box="-40(GGCTAGAAAGGG,-,0.00)" | ||
Revision as of 10:09, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 102189855 |
|---|---|
| End of the center position in the TSS region: | 102189856 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK165395 AY186239 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | AK165395:0 AY186239:0 ENSMUST00000139995.1:-15 ENSMUST00000131382.7:-86 NM_175935:-142 uc007lqt.2:-142 BC069959:-142 ENSMUST00000078975.7:-172 ENSMUST00000070334.9:-221 AK002966:-221 |
TATA-Box annotation
| Distance to TSS: | 156 |
|---|---|
| Nearest PromoterID: | NM_175935 |
| Entrez ID: | 68401 |
| Nearest Unigene: | Mm.22385 |
| Nearest Refseq: | NM_175935 |
| Nearest Ensembl: | ENSMUSG00000034793 |
| Gene Name: | "glucose 6 phosphatase, catalytic, 3" |
| Gene Alias: | 0710001K01Rik |
| Gene Description: | "glucose 6 phosphatase, catalytic, 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-40(GGCTAGAAAGGG,-,0.00)" |
