Difference between revisions of "TSS:Mm 99402.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK200530:99 ENSMUST00000153178.1:-333 ENSMUST00000145490.7:-339 |chr=chr11 |cpg_percent=0.015 |distance=99 |distance_to_tss=2672 |end=102192384 |entrez_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AU019276= | ||
| + | |AU045429= | ||
| + | |AV128920= | ||
| + | |AW545836= | ||
| + | |UGRP= | ||
|all_trans=AK200530:99 ENSMUST00000153178.1:-333 ENSMUST00000145490.7:-339 | |all_trans=AK200530:99 ENSMUST00000153178.1:-333 ENSMUST00000145490.7:-339 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=2672 | |distance_to_tss=2672 | ||
|end=102192384 | |end=102192384 | ||
| + | |end_of_center_position=102192371 | ||
|entrez_id=68401 | |entrez_id=68401 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=0710001K01Rik | + | |gene_alias=0710001K01Rik |
|gene_description="glucose 6 phosphatase, catalytic, 3" | |gene_description="glucose 6 phosphatase, catalytic, 3" | ||
|gene_id=68401 | |gene_id=68401 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=102192357 | |start=102192357 | ||
| + | |start_of_center_position=102192370 | ||
|strand=+ | |strand=+ | ||
|tata_box="-59(CCTCATAAAGCC,+,0.00)" | |tata_box="-59(CCTCATAAAGCC,+,0.00)" | ||
Revision as of 10:09, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 102192370 |
|---|---|
| End of the center position in the TSS region: | 102192371 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK200530 |
|---|---|
| Distance: | 99 |
| Num_trans: | 3 |
| All_trans: | AK200530:99 ENSMUST00000153178.1:-333 ENSMUST00000145490.7:-339 |
TATA-Box annotation
| Distance to TSS: | 2672 |
|---|---|
| Nearest PromoterID: | NM_175935 |
| Entrez ID: | 68401 |
| Nearest Unigene: | Mm.22385 |
| Nearest Refseq: | NM_175935 |
| Nearest Ensembl: | ENSMUSG00000034793 |
| Gene Name: | "glucose 6 phosphatase, catalytic, 3" |
| Gene Alias: | 0710001K01Rik |
| Gene Description: | "glucose 6 phosphatase, catalytic, 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-59(CCTCATAAAGCC,+,0.00)" |
