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Difference between revisions of "TSS:Hg 111885.1"

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Line 6: Line 6:
 
|distance_to_tss=-2
 
|distance_to_tss=-2
 
|end=125160569
 
|end=125160569
 +
|end_of_center_position=125160543
 
|entrez_id=1488
 
|entrez_id=1488
 
|gc_percent=0.696517
 
|gc_percent=0.696517
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=125160516
 
|start=125160516
 +
|start_of_center_position=125160542
 
|strand=-
 
|strand=-
 
|transcript_name=NM_001329 NM_001290214
 
|transcript_name=NM_001329 NM_001290214

Revision as of 10:14, 12 May 2019

Basic information about the TSS


TSS ID:hg_111885.1
Species:human
Chr:chr10
TSS Classification:yes
Start:125160516
End:125160569
Strand:-
TSS Score:1
Start of the center position in the TSS region:125160542
End of the center position in the TSS region:125160543



Gene and protein annotation


Transcript_name:NM_001329 NM_001290214
Distance:0
GeneID:1488
HGNC/MGI_ID:HGNC:2495
UniProt_ID:P56545
Gene_name:C-terminal binding protein 2
Gene_symbol:CTBP2
Gene_synonyms:ribeye
Gene_source:HGNC:2495



Transcript annotation


Transcript_name:NM_001329 NM_001290214
Distance:0
Num_trans:19
All_trans:NM_001329:0 NM_001290214:0 BC002486:3 ENST00000337195.9:4 uc009yal.4:4 AL833398:4 ENST00000494626.6:18 uc001lif.5:18 BC052276:19 BC072020:42 AF016507:62 ENST00000460976.5:372 uc057wqm.1:372 ENST00000411419.6:-457 uc001lih.5:-457 BC047018:-457 NM_001083914:-486 ENST00000530884.1:-492 uc057wqp.1:-492



TATA-Box annotation


Distance to TSS:-2
Nearest PromoterID:NM_001329
Entrez ID:1488
Nearest Unigene:Hs.501345
Nearest Refseq:NM_001329
Nearest Ensembl:ENSG00000175029
Gene Name:C-terminal binding protein 2
Gene Alias:-
Gene Description:C-terminal binding protein 2
Gene Type:protein-coding
CpG%:0.08
GC%:0.696517
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):