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Difference between revisions of "TSS:Mm 99446.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000148580.1:398 AK196399:-500 AK205747:-500 |chr=chr11 |cpg_percent=0.01 |distance=398 |distance_to_tss=3204 |end=102433534 |entrez_id=14824 |g...")
 
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|distance_to_tss=3204
 
|distance_to_tss=3204
 
|end=102433534
 
|end=102433534
 +
|end_of_center_position=102433527
 
|entrez_id=14824
 
|entrez_id=14824
 +
|epithelin=
 
|gc_percent=0.577114
 
|gc_percent=0.577114
|gene_alias=Pgrn|epithelin
+
|gene_alias=Pgrn
 
|gene_description=granulin
 
|gene_description=granulin
 
|gene_id=14824
 
|gene_id=14824
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|species=mouse
 
|species=mouse
 
|start=102433518
 
|start=102433518
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|start_of_center_position=102433526
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000148580.1
 
|transcript_name=ENSMUST00000148580.1

Revision as of 10:17, 12 May 2019

Basic information about the TSS


TSS ID:mm_99446.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:102433518
End:102433534
Strand:+
TSS Score:1
Start of the center position in the TSS region:102433526
End of the center position in the TSS region:102433527



Gene and protein annotation


Transcript_name:ENSMUST00000148580.1
Distance:398
GeneID:14824
HGNC/MGI_ID:MGI:95832
UniProt_ID:
Gene_name:granulin
Gene_symbol:Grn
Gene_synonyms:PC_cell-derived_growth_factor Pgrn acrogranulin epithelin progranulin
Gene_source:MGI:95832



Transcript annotation


Transcript_name:ENSMUST00000148580.1
Distance:398
Num_trans:3
All_trans:ENSMUST00000148580.1:398 AK196399:-500 AK205747:-500



TATA-Box annotation


Distance to TSS:3204
Nearest PromoterID:NM_008175
Entrez ID:14824
Nearest Unigene:Mm.1568
Nearest Refseq:NM_008175
Nearest Ensembl:ENSMUSG00000034708
Gene Name:granulin
Gene Alias:Pgrn
Gene Description:granulin
Gene Type:protein-coding
CpG%:0.01
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):