Difference between revisions of "TSS:Mm 50369.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC096680:-2 AK041336:-14 NM_174960:-26 uc009bvh.1:-26 ENSMUST00000054050.4:-32 BC038043:34 |chr=chr6 |cpg_percent=0.01 |distance=-2 |distance_to_tss=40...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BB145400= | ||
|all_trans=BC096680:-2 AK041336:-14 NM_174960:-26 uc009bvh.1:-26 ENSMUST00000054050.4:-32 BC038043:34 | |all_trans=BC096680:-2 AK041336:-14 NM_174960:-26 uc009bvh.1:-26 ENSMUST00000054050.4:-32 BC038043:34 | ||
|chr=chr6 | |chr=chr6 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=40 | |distance_to_tss=40 | ||
|end=48676190 | |end=48676190 | ||
| + | |end_of_center_position=48676176 | ||
|entrez_id=317758 | |entrez_id=317758 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=A630002K24 | + | |gene_alias=A630002K24 |
|gene_description="GTPase, IMAP family member 9" | |gene_description="GTPase, IMAP family member 9" | ||
|gene_id=317758 | |gene_id=317758 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=48676160 | |start=48676160 | ||
| + | |start_of_center_position=48676175 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC096680 | |transcript_name=BC096680 | ||
Revision as of 10:23, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 48676175 |
|---|---|
| End of the center position in the TSS region: | 48676176 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC096680 |
|---|---|
| Distance: | -2 |
| Num_trans: | 6 |
| All_trans: | BC096680:-2 AK041336:-14 NM_174960:-26 uc009bvh.1:-26 ENSMUST00000054050.4:-32 BC038043:34 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_174960 |
| Entrez ID: | 317758 |
| Nearest Unigene: | Mm.116971 |
| Nearest Refseq: | NM_174960 |
| Nearest Ensembl: | ENSMUSG00000051124 |
| Gene Name: | "GTPase, IMAP family member 9" |
| Gene Alias: | A630002K24 |
| Gene Description: | "GTPase, IMAP family member 9" |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
