Difference between revisions of "TSS:Hg 107643.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=0 | |distance_to_tss=0 | ||
|end=127987287 | |end=127987287 | ||
| + | |end_of_center_position=127987280 | ||
|entrez_id=5791 | |entrez_id=5791 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=HPTPE | + | |gene_alias=HPTPE |
|gene_description="protein tyrosine phosphatase, receptor type E" | |gene_description="protein tyrosine phosphatase, receptor type E" | ||
|gene_id=5791 | |gene_id=5791 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=127987272 | |start=127987272 | ||
| + | |start_of_center_position=127987279 | ||
|strand=+ | |strand=+ | ||
|tata_box="-33(TCCTATATAAAC,-,0.00)" | |tata_box="-33(TCCTATATAAAC,-,0.00)" | ||
Revision as of 10:29, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 127987279 |
|---|---|
| End of the center position in the TSS region: | 127987280 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001316677 AK291828 AK300613 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | NM_001316677:0 AK291828:0 AK300613:0 AK299498:26 ENST00000471218.5:57 uc057wur.1:57 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001316677 |
| Entrez ID: | 5791 |
| Nearest Unigene: | Hs.127022 |
| Nearest Refseq: | NM_006504 |
| Nearest Ensembl: | ENSG00000132334 |
| Gene Name: | "protein tyrosine phosphatase, receptor type E" |
| Gene Alias: | HPTPE |
| Gene Description: | "protein tyrosine phosphatase, receptor type E" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-33(TCCTATATAAAC,-,0.00)" |
