Difference between revisions of "TSS:Mm 99635.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |PKU-alpha= | ||
| + | |PKUalpha= | ||
| + | |Tlk= | ||
|all_trans=AK165667:-108 ENSMUST00000106941.8:-111 NM_001294329:-111 NM_001112705:-111 NM_001294334:-111 NM_001294330:-111 uc007lxd.3:-111 uc007lxe.3:-111 uc007lxf.3:-111 uc007lxg.3:-111 ENSMUST00000092537.9:130 AK014829:227 ENSMUST00000015107.12:254 ENSMUST00000145048.7:319 BC066198:319 ENSMUST00000126175.7:336 AK089925:336 | |all_trans=AK165667:-108 ENSMUST00000106941.8:-111 NM_001294329:-111 NM_001112705:-111 NM_001294334:-111 NM_001294330:-111 uc007lxd.3:-111 uc007lxe.3:-111 uc007lxf.3:-111 uc007lxg.3:-111 ENSMUST00000092537.9:130 AK014829:227 ENSMUST00000015107.12:254 ENSMUST00000145048.7:319 BC066198:319 ENSMUST00000126175.7:336 AK089925:336 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=123 | |distance_to_tss=123 | ||
|end=105181663 | |end=105181663 | ||
| + | |end_of_center_position=105181651 | ||
|entrez_id=24086 | |entrez_id=24086 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=4933403M19Rik | + | |gene_alias=4933403M19Rik |
|gene_description=tousled-like kinase 2 (Arabidopsis) | |gene_description=tousled-like kinase 2 (Arabidopsis) | ||
|gene_id=24086 | |gene_id=24086 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=105181637 | |start=105181637 | ||
| + | |start_of_center_position=105181650 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK165667 | |transcript_name=AK165667 | ||
Revision as of 10:44, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 105181650 |
|---|---|
| End of the center position in the TSS region: | 105181651 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK165667 |
|---|---|
| Distance: | -108 |
| Num_trans: | 17 |
| All_trans: | AK165667:-108 ENSMUST00000106941.8:-111 NM_001294329:-111 NM_001112705:-111 NM_001294334:-111 NM_001294330:-111 uc007lxd.3:-111 uc007lxe.3:-111 uc007lxf.3:-111 uc007lxg.3:-111 ENSMUST00000092537.9:130 AK014829:227 ENSMUST00000015107.12:254 ENSMUST00000145048.7:319 BC066198:319 ENSMUST00000126175.7:336 AK089925:336 |
TATA-Box annotation
| Distance to TSS: | 123 |
|---|---|
| Nearest PromoterID: | NM_001294329 |
| Entrez ID: | 24086 |
| Nearest Unigene: | Mm.126976 |
| Nearest Refseq: | NM_011903 |
| Nearest Ensembl: | ENSMUSG00000020694 |
| Gene Name: | tousled-like kinase 2 (Arabidopsis) |
| Gene Alias: | 4933403M19Rik |
| Gene Description: | tousled-like kinase 2 (Arabidopsis) |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
