Difference between revisions of "TSS:Mm 99718.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000142472.7:-20 NM_029467:-20 uc007lyq.1:-20 uc007lyr.1:-20 AK076581:-20 AK016263:20 ENSMUST00000044462.3:46 BC050746:46 uc056yox.1:-152 AK1620...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AI429105= | ||
|all_trans=ENSMUST00000142472.7:-20 NM_029467:-20 uc007lyq.1:-20 uc007lyr.1:-20 AK076581:-20 AK016263:20 ENSMUST00000044462.3:46 BC050746:46 uc056yox.1:-152 AK162061:-152 | |all_trans=ENSMUST00000142472.7:-20 NM_029467:-20 uc007lyq.1:-20 uc007lyr.1:-20 AK076581:-20 AK016263:20 ENSMUST00000044462.3:46 BC050746:46 uc056yox.1:-152 AK162061:-152 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=25 | |distance_to_tss=25 | ||
|end=106276702 | |end=106276702 | ||
| + | |end_of_center_position=106276697 | ||
|entrez_id=75870 | |entrez_id=75870 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=4930570F09Rik | + | |gene_alias=4930570F09Rik |
|gene_description=testicular cell adhesion molecule 1 | |gene_description=testicular cell adhesion molecule 1 | ||
|gene_id=75870 | |gene_id=75870 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=106276691 | |start=106276691 | ||
| + | |start_of_center_position=106276696 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000142472.7 NM_029467 uc007lyq.1 uc007lyr.1 AK076581 | |transcript_name=ENSMUST00000142472.7 NM_029467 uc007lyq.1 uc007lyr.1 AK076581 | ||
Revision as of 10:55, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 106276696 |
|---|---|
| End of the center position in the TSS region: | 106276697 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000142472.7 NM_029467 uc007lyq.1 uc007lyr.1 AK076581 |
|---|---|
| Distance: | -20 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000142472.7:-20 NM_029467:-20 uc007lyq.1:-20 uc007lyr.1:-20 AK076581:-20 AK016263:20 ENSMUST00000044462.3:46 BC050746:46 uc056yox.1:-152 AK162061:-152 |
TATA-Box annotation
| Distance to TSS: | 25 |
|---|---|
| Nearest PromoterID: | NM_029467 |
| Entrez ID: | 75870 |
| Nearest Unigene: | Mm.159608 |
| Nearest Refseq: | NM_029467 |
| Nearest Ensembl: | ENSMUSG00000020712 |
| Gene Name: | testicular cell adhesion molecule 1 |
| Gene Alias: | 4930570F09Rik |
| Gene Description: | testicular cell adhesion molecule 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
