Difference between revisions of "TSS:Hg 232187.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001012508:8 ENST00000414069.2:53 uc001lnf.5:53 BC040198:53 |chr=chr10 |cpg_percent=0.14 |distance=8 |distance_to_tss=-8 |end=133424625 |entrez_id=503...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |SHO= | ||
|all_trans=NM_001012508:8 ENST00000414069.2:53 uc001lnf.5:53 BC040198:53 | |all_trans=NM_001012508:8 ENST00000414069.2:53 uc001lnf.5:53 BC040198:53 | ||
| + | |bA108K14.1= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-8 | |distance_to_tss=-8 | ||
|end=133424625 | |end=133424625 | ||
| + | |end_of_center_position=133569420 | ||
|entrez_id=503542 | |entrez_id=503542 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=SHADOO | + | |gene_alias=SHADOO |
|gene_description=shadow of prion protein homolog (zebrafish) | |gene_description=shadow of prion protein homolog (zebrafish) | ||
|gene_id=503542 | |gene_id=503542 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=133424624 | |start=133424624 | ||
| + | |start_of_center_position=133569419 | ||
|strand=- | |strand=- | ||
|transcript_name=NM_001012508 | |transcript_name=NM_001012508 | ||
Revision as of 10:57, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133569419 |
|---|---|
| End of the center position in the TSS region: | 133569420 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001012508 |
|---|---|
| Distance: | 8 |
| Num_trans: | 4 |
| All_trans: | NM_001012508:8 ENST00000414069.2:53 uc001lnf.5:53 BC040198:53 |
TATA-Box annotation
| Distance to TSS: | -8 |
|---|---|
| Nearest PromoterID: | NM_001012508 |
| Entrez ID: | 503542 |
| Nearest Unigene: | Hs.64968 |
| Nearest Refseq: | NM_001012508 |
| Nearest Ensembl: | ENSG00000203772 |
| Gene Name: | shadow of prion protein homolog (zebrafish) |
| Gene Alias: | SHADOO |
| Gene Description: | shadow of prion protein homolog (zebrafish) |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
