Difference between revisions of "TSS:Hg 112293.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-2102 | |distance_to_tss=-2102 | ||
|end=826180 | |end=826180 | ||
| + | |end_of_center_position=826159 | ||
|entrez_id=283229 | |entrez_id=283229 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=826136 | |start=826136 | ||
| + | |start_of_center_position=826158 | ||
|strand=+ | |strand=+ | ||
|tata_box="42(TCCTTGAAAAGC,-,0.00)" | |tata_box="42(TCCTTGAAAAGC,-,0.00)" | ||
Revision as of 11:18, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 826158 |
|---|---|
| End of the center position in the TSS region: | 826159 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000528315.1 ENST00000533803.1 ENST00000534191.1 uc057xob.1 uc057xoc.1 uc010qwt.4 AK304093 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000528315.1:0 ENST00000533803.1:0 ENST00000534191.1:0 uc057xob.1:0 uc057xoc.1:0 uc010qwt.4:0 AK304093:0 |
TATA-Box annotation
| Distance to TSS: | -2102 |
|---|---|
| Nearest PromoterID: | NM_173584 |
| Entrez ID: | 283229 |
| Nearest Unigene: | Hs.660936 |
| Nearest Refseq: | NM_173584 |
| Nearest Ensembl: | ENSG00000177685 |
| Gene Name: | calcium release activated channel regulator 2B |
| Gene Alias: | EFCAB4A |
| Gene Description: | calcium release activated channel regulator 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "42(TCCTTGAAAAGC,-,0.00)" |
