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Difference between revisions of "TSS:Hg 117855.1"

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Line 8: Line 8:
 
|distance_to_tss=44
 
|distance_to_tss=44
 
|end=915016
 
|end=915016
 +
|end_of_center_position=915015
 
|entrez_id=66005
 
|entrez_id=66005
 
|gc_percent=0.597015
 
|gc_percent=0.597015
|gene_alias=GL008|SI-CLP|SICLP
+
|gene_alias=GL008
 
|gene_description=chitinase domain containing 1
 
|gene_description=chitinase domain containing 1
 
|gene_id=66005
 
|gene_id=66005
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=915012
 
|start=915012
 +
|start_of_center_position=915014
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000449825.5 ENST00000533056.5 NM_001142675 uc010qww.3 uc057xqh.1
 
|transcript_name=ENST00000449825.5 ENST00000533056.5 NM_001142675 uc010qww.3 uc057xqh.1

Revision as of 11:22, 12 May 2019

Basic information about the TSS


TSS ID:hg_117855.1
Species:human
Chr:chr11
TSS Classification:yes
Start:915012
End:915016
Strand:-
TSS Score:1
Start of the center position in the TSS region:915014
End of the center position in the TSS region:915015



Gene and protein annotation


Transcript_name:ENST00000449825.5 ENST00000533056.5 NM_001142675 uc010qww.3 uc057xqh.1
Distance:-42
GeneID:66005
HGNC/MGI_ID:HGNC:28474
UniProt_ID:E9PRL3 Q9BWS9
Gene_name:chitinase domain containing 1
Gene_symbol:CHID1
Gene_synonyms:FLJ42707 MGC3234
Gene_source:HGNC:28474



Transcript annotation


Transcript_name:ENST00000449825.5 ENST00000533056.5 NM_001142675 uc010qww.3 uc057xqh.1
Distance:-42
Num_trans:12
All_trans:ENST00000449825.5:-42 ENST00000533056.5:-42 NM_001142675:-42 uc010qww.3:-42 uc057xqh.1:-42 ENST00000533059.5:193 uc057xqi.1:193 ENST00000525840.1:212 uc057xql.1:212 ENST00000528154.1:239 uc057xqm.1:239 AK301245:331



TATA-Box annotation


Distance to TSS:44
Nearest PromoterID:NM_001142675
Entrez ID:66005
Nearest Unigene:Hs.144468
Nearest Refseq:NM_023947
Nearest Ensembl:ENSG00000177830
Gene Name:chitinase domain containing 1
Gene Alias:GL008
Gene Description:chitinase domain containing 1
Gene Type:protein-coding
CpG%:0.015
GC%:0.597015
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):