Difference between revisions of "TSS:Mm 159923.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000114374.8:-53 NM_001288619:-53 NM_001288620:-53 uc009caj.3:-53 uc012emh.2:-53 AY445512:-53 ENSMUST00000169777.1:89 ENSMUST00000095898.9:-125...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CRFR2alpha= | ||
| + | |CRFR2beta= | ||
| + | |Crfr2= | ||
|all_trans=ENSMUST00000114374.8:-53 NM_001288619:-53 NM_001288620:-53 uc009caj.3:-53 uc012emh.2:-53 AY445512:-53 ENSMUST00000169777.1:89 ENSMUST00000095898.9:-125 AY753668:-125 | |all_trans=ENSMUST00000114374.8:-53 NM_001288619:-53 NM_001288620:-53 uc009caj.3:-53 uc012emh.2:-53 AY445512:-53 ENSMUST00000169777.1:89 ENSMUST00000095898.9:-125 AY753668:-125 | ||
|chr=chr6 | |chr=chr6 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=53 | |distance_to_tss=53 | ||
|end=55117860 | |end=55117860 | ||
| + | |end_of_center_position=55117860 | ||
|entrez_id=12922 | |entrez_id=12922 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=CRF-R2 | + | |gene_alias=CRF-R2 |
|gene_description=corticotropin releasing hormone receptor 2 | |gene_description=corticotropin releasing hormone receptor 2 | ||
|gene_id=12922 | |gene_id=12922 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=55117859 | |start=55117859 | ||
| + | |start_of_center_position=55117859 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000114374.8 NM_001288619 NM_001288620 uc009caj.3 uc012emh.2 AY445512 | |transcript_name=ENSMUST00000114374.8 NM_001288619 NM_001288620 uc009caj.3 uc012emh.2 AY445512 | ||
Revision as of 11:31, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 55117859 |
|---|---|
| End of the center position in the TSS region: | 55117860 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000114374.8 NM_001288619 NM_001288620 uc009caj.3 uc012emh.2 AY445512 |
|---|---|
| Distance: | -53 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000114374.8:-53 NM_001288619:-53 NM_001288620:-53 uc009caj.3:-53 uc012emh.2:-53 AY445512:-53 ENSMUST00000169777.1:89 ENSMUST00000095898.9:-125 AY753668:-125 |
TATA-Box annotation
| Distance to TSS: | 53 |
|---|---|
| Nearest PromoterID: | NM_001288619 |
| Entrez ID: | 12922 |
| Nearest Unigene: | Mm.236081 |
| Nearest Refseq: | NM_009953 |
| Nearest Ensembl: | ENSMUSG00000003476 |
| Gene Name: | corticotropin releasing hormone receptor 2 |
| Gene Alias: | CRF-R2 |
| Gene Description: | corticotropin releasing hormone receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
