Personal tools

Difference between revisions of "TSS:Hg 118088.1"

From referenceTSS

Jump to: navigation, search
Line 6: Line 6:
 
|distance_to_tss=866
 
|distance_to_tss=866
 
|end=1995982
 
|end=1995982
 +
|end_of_center_position=1995966
 
|entrez_id=100033819
 
|entrez_id=100033819
 
|gc_percent=0.557214
 
|gc_percent=0.557214
|gene_alias=MIRN675|hsa-mir-675
+
|gene_alias=MIRN675
 
|gene_description=microRNA 675
 
|gene_description=microRNA 675
 
|gene_id=283120
 
|gene_id=283120
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=1995948
 
|start=1995948
 +
|start_of_center_position=1995965
 
|strand=-
 
|strand=-
 
|transcript_name=BC106078
 
|transcript_name=BC106078

Revision as of 12:05, 12 May 2019

Basic information about the TSS


TSS ID:hg_118088.1
Species:human
Chr:chr11
TSS Classification:yes
Start:1995948
End:1995982
Strand:-
TSS Score:1
Start of the center position in the TSS region:1995965
End of the center position in the TSS region:1995966



Gene and protein annotation


Transcript_name:BC106078
Distance:-6
GeneID:283120
HGNC/MGI_ID:HGNC:4713
UniProt_ID:
Gene_name:"H19, imprinted maternally expressed transcript (non-protein coding)"
Gene_symbol:H19
Gene_synonyms:ASM ASM1 D11S813E LINC00008 NCRNA00008
Gene_source:HGNC:4713



Transcript annotation


Transcript_name:BC106078
Distance:-6
Num_trans:7
All_trans:BC106078:-6 ENST00000442037.5:-209 uc021qbx.3:-209 BC010185:376 BC106079:435 ENST00000447298.1:-485 uc057xvz.1:-485



TATA-Box annotation


Distance to TSS:866
Nearest PromoterID:NR_030533
Entrez ID:100033819
Nearest Unigene:
Nearest Refseq:NR_030533
Nearest Ensembl:ENSG00000130600
Gene Name:"H19, imprinted maternally expressed transcript (non-protein coding)"
Gene Alias:MIRN675
Gene Description:microRNA 675
Gene Type:ncRNA
CpG%:0.02
GC%:0.557214
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):