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Difference between revisions of "TSS:Hg 118093.1"

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Line 6: Line 6:
 
|distance_to_tss=681
 
|distance_to_tss=681
 
|end=1996163
 
|end=1996163
 +
|end_of_center_position=1996150
 
|entrez_id=100033819
 
|entrez_id=100033819
 
|gc_percent=0.621891
 
|gc_percent=0.621891
|gene_alias=MIRN675|hsa-mir-675
+
|gene_alias=MIRN675
 
|gene_description=microRNA 675
 
|gene_description=microRNA 675
 
|gene_id=283120
 
|gene_id=283120
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=1996136
 
|start=1996136
 +
|start_of_center_position=1996149
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000442037.5 uc021qbx.3
 
|transcript_name=ENST00000442037.5 uc021qbx.3

Revision as of 12:05, 12 May 2019

Basic information about the TSS


TSS ID:hg_118093.1
Species:human
Chr:chr11
TSS Classification:yes
Start:1996136
End:1996163
Strand:-
TSS Score:1
Start of the center position in the TSS region:1996149
End of the center position in the TSS region:1996150



Gene and protein annotation


Transcript_name:ENST00000442037.5 uc021qbx.3
Distance:-28
GeneID:283120
HGNC/MGI_ID:HGNC:4713
UniProt_ID:
Gene_name:"H19, imprinted maternally expressed transcript (non-protein coding)"
Gene_symbol:H19
Gene_synonyms:ASM ASM1 D11S813E LINC00008 NCRNA00008
Gene_source:HGNC:4713



Transcript annotation


Transcript_name:ENST00000442037.5 uc021qbx.3
Distance:-28
Num_trans:9
All_trans:ENST00000442037.5:-28 uc021qbx.3:-28 BC106078:149 ENST00000447298.1:-304 uc057xvz.1:-304 ENST00000436715.5:-408 uc057xvx.1:-408 BC009853:-430 AK123560:-438



TATA-Box annotation


Distance to TSS:681
Nearest PromoterID:NR_030533
Entrez ID:100033819
Nearest Unigene:
Nearest Refseq:NR_030533
Nearest Ensembl:ENSG00000130600
Gene Name:"H19, imprinted maternally expressed transcript (non-protein coding)"
Gene Alias:MIRN675
Gene Description:microRNA 675
Gene Type:ncRNA
CpG%:0.04
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):