Difference between revisions of "TSS:Hg 224645.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000447298.1:-108 uc057xvz.1:-108 ENST00000442037.5:164 uc021qbx.3:164 ENST00000436715.5:-212 uc057xvx.1:-212 BC009853:-234 AK123560:-242 BC013067:...") |
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|distance_to_tss=474 | |distance_to_tss=474 | ||
|end=1996359 | |end=1996359 | ||
| + | |end_of_center_position=1996357 | ||
|entrez_id=100033819 | |entrez_id=100033819 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=MIRN675 | + | |gene_alias=MIRN675 |
|gene_description=microRNA 675 | |gene_description=microRNA 675 | ||
|gene_id=283120 | |gene_id=283120 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:4713 | |hgnc_mgi_id=HGNC:4713 | ||
| + | |hsa-mir-675= | ||
|nearest_ensembl=ENSG00000130600 | |nearest_ensembl=ENSG00000130600 | ||
|nearest_promoter_id=NR_030533 | |nearest_promoter_id=NR_030533 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=1996354 | |start=1996354 | ||
| + | |start_of_center_position=1996356 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000447298.1 uc057xvz.1 | |transcript_name=ENST00000447298.1 uc057xvz.1 | ||
Revision as of 12:06, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 1996356 |
|---|---|
| End of the center position in the TSS region: | 1996357 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000447298.1 uc057xvz.1 |
|---|---|
| Distance: | -108 |
| Num_trans: | 12 |
| All_trans: | ENST00000447298.1:-108 uc057xvz.1:-108 ENST00000442037.5:164 uc021qbx.3:164 ENST00000436715.5:-212 uc057xvx.1:-212 BC009853:-234 AK123560:-242 BC013067:-346 BC106078:367 AB372813:-428 LG052084:-472 |
TATA-Box annotation
| Distance to TSS: | 474 |
|---|---|
| Nearest PromoterID: | NR_030533 |
| Entrez ID: | 100033819 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030533 |
| Nearest Ensembl: | ENSG00000130600 |
| Gene Name: | "H19, imprinted maternally expressed transcript (non-protein coding)" |
| Gene Alias: | MIRN675 |
| Gene Description: | microRNA 675 |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
