Difference between revisions of "TSS:Hg 118119.1"
From referenceTSS
| Line 12: | Line 12: | ||
|distance_to_tss=33 | |distance_to_tss=33 | ||
|end=1997848 | |end=1997848 | ||
| + | |end_of_center_position=1997842 | ||
|entrez_id=283120 | |entrez_id=283120 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=ASM | + | |gene_alias=ASM |
|gene_description="H19, imprinted maternally expressed transcript (non-protein coding)" | |gene_description="H19, imprinted maternally expressed transcript (non-protein coding)" | ||
|gene_id=283120 | |gene_id=283120 | ||
| Line 30: | Line 31: | ||
|species=human | |species=human | ||
|start=1997835 | |start=1997835 | ||
| + | |start_of_center_position=1997841 | ||
|strand=- | |strand=- | ||
|transcript_name=AK056774 AK092486 AK311497 AK309887 | |transcript_name=AK056774 AK092486 AK311497 AK309887 | ||
Revision as of 12:09, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 1997841 |
|---|---|
| End of the center position in the TSS region: | 1997842 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK056774 AK092486 AK311497 AK309887 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | AK056774:0 AK092486:0 AK311497:0 AK309887:0 ENST00000446406.5:9 uc057xvt.1:9 ENST00000431095.5:21 uc057xvw.1:21 ENST00000412788.5:22 uc001lva.5:22 ENST00000414790.5:-27 NR_131223:-27 NR_002196:-27 uc021qby.2:-27 ENST00000422826.1:39 ENST00000411754.5:39 uc057xvs.1:39 uc057xvv.1:39 BC040073:58 BC040852:75 BC002550:180 BC115700:333 BC053636:362 BC110657:362 ENST00000439725.5:376 uc021qca.2:376 BC015952:479 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NR_002196 |
| Entrez ID: | 283120 |
| Nearest Unigene: | Hs.533566 |
| Nearest Refseq: | NR_002196 |
| Nearest Ensembl: | ENSG00000130600 |
| Gene Name: | "H19, imprinted maternally expressed transcript (non-protein coding)" |
| Gene Alias: | ASM |
| Gene Description: | "H19, imprinted maternally expressed transcript (non-protein coding)" |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
