Difference between revisions of "TSS:Hg 118390.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=-8728 | |distance_to_tss=-8728 | ||
|end=5938627 | |end=5938627 | ||
| + | |end_of_center_position=5938619 | ||
|entrez_id=390083 | |entrez_id=390083 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=OR56A2P | + | |gene_alias=OR56A2P |
|gene_description=olfactory receptor family 56 subfamily A member 3 | |gene_description=olfactory receptor family 56 subfamily A member 3 | ||
|gene_id=85363 | |gene_id=85363 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=5938610 | |start=5938610 | ||
| + | |start_of_center_position=5938618 | ||
|strand=- | |strand=- | ||
|tata_box="-33(CCCTTTAAATAC,+,0.00),-33(CCCTTTAAATAC,-,0.00),-31(CTTTAAATACAC,+,0.00)" | |tata_box="-33(CCCTTTAAATAC,+,0.00),-33(CCCTTTAAATAC,-,0.00),-31(CTTTAAATACAC,+,0.00)" | ||
Revision as of 12:48, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 5938618 |
|---|---|
| End of the center position in the TSS region: | 5938619 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000412903.1 uc057yih.1 BC020770 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000412903.1:0 uc057yih.1:0 BC020770:0 |
TATA-Box annotation
| Distance to TSS: | -8728 |
|---|---|
| Nearest PromoterID: | NM_001003443 |
| Entrez ID: | 390083 |
| Nearest Unigene: | Hs.553741 |
| Nearest Refseq: | NM_001003443 |
| Nearest Ensembl: | ENSG00000184478 |
| Gene Name: | tripartite motif containing 5 |
| Gene Alias: | OR56A2P |
| Gene Description: | olfactory receptor family 56 subfamily A member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-33(CCCTTTAAATAC,+,0.00),-33(CCCTTTAAATAC,-,0.00),-31(CTTTAAATACAC,+,0.00)" |
