Difference between revisions of "TSS:Hg 233630.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000540345.5:109 NM_001146209:109 uc010rrb.3:109 AY495087:109 |chr=chr11 |cpg_percent=0.005 |distance=109 |distance_to_tss=-109 |end=72669173 |entr...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PDE2A1= | ||
| + | |PED2A4= | ||
|all_trans=ENST00000540345.5:109 NM_001146209:109 uc010rrb.3:109 AY495087:109 | |all_trans=ENST00000540345.5:109 NM_001146209:109 uc010rrb.3:109 AY495087:109 | ||
| + | |cGSPDE= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-109 | |distance_to_tss=-109 | ||
|end=72669173 | |end=72669173 | ||
| + | |end_of_center_position=7576800 | ||
|entrez_id=5138 | |entrez_id=5138 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=CGS-PDE | + | |gene_alias=CGS-PDE |
|gene_description=phosphodiesterase 2A | |gene_description=phosphodiesterase 2A | ||
|gene_id=5138 | |gene_id=5138 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=72669172 | |start=72669172 | ||
| + | |start_of_center_position=7576799 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000540345.5 NM_001146209 uc010rrb.3 AY495087 | |transcript_name=ENST00000540345.5 NM_001146209 uc010rrb.3 AY495087 | ||
Revision as of 13:00, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 7576799 |
|---|---|
| End of the center position in the TSS region: | 7576800 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000540345.5 NM_001146209 uc010rrb.3 AY495087 |
|---|---|
| Distance: | 109 |
| Num_trans: | 4 |
| All_trans: | ENST00000540345.5:109 NM_001146209:109 uc010rrb.3:109 AY495087:109 |
TATA-Box annotation
| Distance to TSS: | -109 |
|---|---|
| Nearest PromoterID: | NM_001146209 |
| Entrez ID: | 5138 |
| Nearest Unigene: | Hs.503163 |
| Nearest Refseq: | NM_002599 |
| Nearest Ensembl: | ENSG00000186642 |
| Gene Name: | phosphodiesterase 2A |
| Gene Alias: | CGS-PDE |
| Gene Description: | phosphodiesterase 2A |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
