Difference between revisions of "TSS:Hg 238111.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000495749.1:-269 uc061wea.1:-269 AK124411:-269 |chr=chr20 |cpg_percent=0.01 |distance=-269 |distance_to_tss=30943 |end=32159422 |entrez_id=128854...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000495749.1:-269 uc061wea.1:-269 AK124411:-269 | |all_trans=ENST00000495749.1:-269 uc061wea.1:-269 AK124411:-269 | ||
| + | |bA392M18.1= | ||
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=30943 | |distance_to_tss=30943 | ||
|end=32159422 | |end=32159422 | ||
| + | |end_of_center_position=57524834 | ||
|entrez_id=128854 | |entrez_id=128854 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=TSPYL3 | + | |gene_alias=TSPYL3 |
|gene_description="testis specific protein, Y-linked 26, pseudogene" | |gene_description="testis specific protein, Y-linked 26, pseudogene" | ||
|gene_id=9777 | |gene_id=9777 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=32159411 | |start=32159411 | ||
| + | |start_of_center_position=57524833 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000495749.1 uc061wea.1 AK124411 | |transcript_name=ENST00000495749.1 uc061wea.1 AK124411 | ||
Revision as of 13:08, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 57524833 |
|---|---|
| End of the center position in the TSS region: | 57524834 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000495749.1 uc061wea.1 AK124411 |
|---|---|
| Distance: | -269 |
| Num_trans: | 3 |
| All_trans: | ENST00000495749.1:-269 uc061wea.1:-269 AK124411:-269 |
TATA-Box annotation
| Distance to TSS: | 30943 |
|---|---|
| Nearest PromoterID: | NR_002781 |
| Entrez ID: | 128854 |
| Nearest Unigene: | Hs.647447 |
| Nearest Refseq: | NR_002781 |
| Nearest Ensembl: | ENSG00000235217 |
| Gene Name: | transmembrane 9 superfamily member 4 |
| Gene Alias: | TSPYL3 |
| Gene Description: | "testis specific protein, Y-linked 26, pseudogene" |
| Gene Type: | pseudo |
| CpG%: | 0.01 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
