Difference between revisions of "TSS:Hg 233735.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK023020:-89 ENST00000367497.1:91 uc057nyb.1:91 |chr=chr1 |cpg_percent=0.01 |distance=-89 |distance_to_tss=6111 |end=185311218 |entrez_id=10625 |gc_perc...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HSPC068= | ||
| + | |KLHL39= | ||
| + | |ND1= | ||
| + | |NS-1= | ||
| + | |NS1-BP= | ||
| + | |NS1BP= | ||
|all_trans=AK023020:-89 ENST00000367497.1:91 uc057nyb.1:91 | |all_trans=AK023020:-89 ENST00000367497.1:91 uc057nyb.1:91 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=6111 | |distance_to_tss=6111 | ||
|end=185311218 | |end=185311218 | ||
| + | |end_of_center_position=9118717 | ||
|entrez_id=10625 | |entrez_id=10625 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| − | |gene_alias=FLARA3 | + | |gene_alias=FLARA3 |
|gene_description=influenza virus NS1A binding protein | |gene_description=influenza virus NS1A binding protein | ||
|gene_id=10625 | |gene_id=10625 | ||
| Line 24: | Line 31: | ||
|species=human | |species=human | ||
|start=185311217 | |start=185311217 | ||
| + | |start_of_center_position=9118716 | ||
|strand=- | |strand=- | ||
|tata_box="-63(GCTTTTAAGGAC,+,0.00)" | |tata_box="-63(GCTTTTAAGGAC,+,0.00)" | ||
Revision as of 13:11, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 9118716 |
|---|---|
| End of the center position in the TSS region: | 9118717 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK023020 |
|---|---|
| Distance: | -89 |
| Num_trans: | 3 |
| All_trans: | AK023020:-89 ENST00000367497.1:91 uc057nyb.1:91 |
TATA-Box annotation
| Distance to TSS: | 6111 |
|---|---|
| Nearest PromoterID: | NM_006469 |
| Entrez ID: | 10625 |
| Nearest Unigene: | Hs.497183 |
| Nearest Refseq: | NM_006469 |
| Nearest Ensembl: | ENSG00000116679 |
| Gene Name: | influenza virus NS1A binding protein |
| Gene Alias: | FLARA3 |
| Gene Description: | influenza virus NS1A binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-63(GCTTTTAAGGAC,+,0.00)" |
