Difference between revisions of "TSS:Mm 100542.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000127269.7:0 ENSMUST00000131727.8:0 ENSMUST00000149389.7:0 ENSMUST00000135346.7:-11 ENSMUST00000153346.7:11 AK088197:-247 ENSMUST00000143844.8...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ASPC= | ||
| + | |ASPCR1= | ||
| + | |ASPL= | ||
| + | |ASPS= | ||
| + | |RCC17= | ||
| + | |TUG= | ||
|all_trans=ENSMUST00000127269.7:0 ENSMUST00000131727.8:0 ENSMUST00000149389.7:0 ENSMUST00000135346.7:-11 ENSMUST00000153346.7:11 AK088197:-247 ENSMUST00000143844.8:-272 ENSMUST00000168714.7:-287 ENSMUST00000103016.7:-306 ENSMUST00000168097.7:-307 ENSMUST00000106158.8:-314 AY349133:-314 BC019177:-329 BC031153:-329 BC022115:-332 ENSMUST00000171700.1:-344 AK162722:-344 ENSMUST00000026135.14:-378 ENSMUST00000169964.1:-397 NM_026877:-397 uc007mua.2:-397 | |all_trans=ENSMUST00000127269.7:0 ENSMUST00000131727.8:0 ENSMUST00000149389.7:0 ENSMUST00000135346.7:-11 ENSMUST00000153346.7:11 AK088197:-247 ENSMUST00000143844.8:-272 ENSMUST00000168714.7:-287 ENSMUST00000103016.7:-306 ENSMUST00000168097.7:-307 ENSMUST00000106158.8:-314 AY349133:-314 BC019177:-329 BC031153:-329 BC022115:-332 ENSMUST00000171700.1:-344 AK162722:-344 ENSMUST00000026135.14:-378 ENSMUST00000169964.1:-397 NM_026877:-397 uc007mua.2:-397 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=408 | |distance_to_tss=408 | ||
|end=120673393 | |end=120673393 | ||
| + | |end_of_center_position=120673382 | ||
|entrez_id=68938 | |entrez_id=68938 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=1190006K01Rik | + | |gene_alias=1190006K01Rik |
|gene_description="alveolar soft part sarcoma chromosome region, candidate 1 (human)" | |gene_description="alveolar soft part sarcoma chromosome region, candidate 1 (human)" | ||
|gene_id=68938 | |gene_id=68938 | ||
| Line 24: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=120673369 | |start=120673369 | ||
| + | |start_of_center_position=120673381 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000127269.7 ENSMUST00000131727.8 ENSMUST00000149389.7 | |transcript_name=ENSMUST00000127269.7 ENSMUST00000131727.8 ENSMUST00000149389.7 | ||
Revision as of 13:23, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120673381 |
|---|---|
| End of the center position in the TSS region: | 120673382 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000127269.7 ENSMUST00000131727.8 ENSMUST00000149389.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENSMUST00000127269.7:0 ENSMUST00000131727.8:0 ENSMUST00000149389.7:0 ENSMUST00000135346.7:-11 ENSMUST00000153346.7:11 AK088197:-247 ENSMUST00000143844.8:-272 ENSMUST00000168714.7:-287 ENSMUST00000103016.7:-306 ENSMUST00000168097.7:-307 ENSMUST00000106158.8:-314 AY349133:-314 BC019177:-329 BC031153:-329 BC022115:-332 ENSMUST00000171700.1:-344 AK162722:-344 ENSMUST00000026135.14:-378 ENSMUST00000169964.1:-397 NM_026877:-397 uc007mua.2:-397 |
TATA-Box annotation
| Distance to TSS: | 408 |
|---|---|
| Nearest PromoterID: | NM_026877 |
| Entrez ID: | 68938 |
| Nearest Unigene: | Mm.294020 |
| Nearest Refseq: | NM_026877 |
| Nearest Ensembl: | ENSMUSG00000025142 |
| Gene Name: | "alveolar soft part sarcoma chromosome region, candidate 1 (human)" |
| Gene Alias: | 1190006K01Rik |
| Gene Description: | "alveolar soft part sarcoma chromosome region, candidate 1 (human)" |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
