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Difference between revisions of "TSS:Hg 189978.1"

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(Created page with "{{TSSDetail |all_trans=X06981:-126 X06982:-126 |chr=chr21 |cpg_percent=0.06 |distance=-126 |distance_to_tss=140337 |end=26000058 |entrez_id=351 |gc_percent=0.557214 |gene_alia...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|ABETA=
 +
|ABPP=
 +
|AD1=
 +
|APPI=
 +
|CTFgamma=
 +
|CVAP=
 +
|PN-II=
 +
|PN2=
 
|all_trans=X06981:-126 X06982:-126
 
|all_trans=X06981:-126 X06982:-126
 
|chr=chr21
 
|chr=chr21
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|distance_to_tss=140337
 
|distance_to_tss=140337
 
|end=26000058
 
|end=26000058
 +
|end_of_center_position=26000053
 
|entrez_id=351
 
|entrez_id=351
 
|gc_percent=0.557214
 
|gc_percent=0.557214
|gene_alias=AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2
+
|gene_alias=AAA
 
|gene_description=amyloid beta precursor protein
 
|gene_description=amyloid beta precursor protein
 
|gene_id=351
 
|gene_id=351
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|species=human
 
|species=human
 
|start=26000047
 
|start=26000047
 +
|start_of_center_position=26000052
 
|strand=-
 
|strand=-
 
|transcript_name=X06981 X06982
 
|transcript_name=X06981 X06982

Revision as of 15:27, 12 May 2019

Basic information about the TSS


TSS ID:hg_189978.1
Species:human
Chr:chr21
TSS Classification:no
Start:26000047
End:26000058
Strand:-
TSS Score:1
Start of the center position in the TSS region:26000052
End of the center position in the TSS region:26000053



Gene and protein annotation


Transcript_name:X06981 X06982
Distance:-126
GeneID:351
HGNC/MGI_ID:HGNC:620
UniProt_ID:
Gene_name:amyloid beta precursor protein
Gene_symbol:APP
Gene_synonyms:
Gene_source:HGNC:620



Transcript annotation


Transcript_name:X06981 X06982
Distance:-126
Num_trans:2
All_trans:X06981:-126 X06982:-126



TATA-Box annotation


Distance to TSS:140337
Nearest PromoterID:NM_001136016
Entrez ID:351
Nearest Unigene:Hs.434980
Nearest Refseq:NM_000484
Nearest Ensembl:ENSG00000142192
Gene Name:amyloid beta precursor protein
Gene Alias:AAA
Gene Description:amyloid beta precursor protein
Gene Type:protein-coding
CpG%:0.06
GC%:0.557214
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):