Difference between revisions of "TSS:Hg 222869.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK295621:12 NM_001136016:-27 ENST00000440126.7:-97 uc010glk.4:-97 AK311717:-97 |chr=chr21 |cpg_percent=0.03 |distance=12 |distance_to_tss=27 |end=261403...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ABETA= | ||
| + | |ABPP= | ||
| + | |AD1= | ||
| + | |APPI= | ||
| + | |CTFgamma= | ||
| + | |CVAP= | ||
| + | |PN-II= | ||
| + | |PN2= | ||
|all_trans=AK295621:12 NM_001136016:-27 ENST00000440126.7:-97 uc010glk.4:-97 AK311717:-97 | |all_trans=AK295621:12 NM_001136016:-27 ENST00000440126.7:-97 uc010glk.4:-97 AK311717:-97 | ||
|chr=chr21 | |chr=chr21 | ||
| Line 6: | Line 14: | ||
|distance_to_tss=27 | |distance_to_tss=27 | ||
|end=26140363 | |end=26140363 | ||
| + | |end_of_center_position=26140363 | ||
|entrez_id=351 | |entrez_id=351 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=AAA | + | |gene_alias=AAA |
|gene_description=amyloid beta precursor protein | |gene_description=amyloid beta precursor protein | ||
|gene_id=351 | |gene_id=351 | ||
| Line 24: | Line 33: | ||
|species=human | |species=human | ||
|start=26140362 | |start=26140362 | ||
| + | |start_of_center_position=26140362 | ||
|strand=- | |strand=- | ||
|tata_box="-31(GCCTAAATAGCA,+,0.00)" | |tata_box="-31(GCCTAAATAGCA,+,0.00)" | ||
Revision as of 15:29, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 26140362 |
|---|---|
| End of the center position in the TSS region: | 26140363 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK295621 |
|---|---|
| Distance: | 12 |
| Num_trans: | 5 |
| All_trans: | AK295621:12 NM_001136016:-27 ENST00000440126.7:-97 uc010glk.4:-97 AK311717:-97 |
TATA-Box annotation
| Distance to TSS: | 27 |
|---|---|
| Nearest PromoterID: | NM_001136016 |
| Entrez ID: | 351 |
| Nearest Unigene: | Hs.434980 |
| Nearest Refseq: | NM_000484 |
| Nearest Ensembl: | ENSG00000142192 |
| Gene Name: | amyloid beta precursor protein |
| Gene Alias: | AAA |
| Gene Description: | amyloid beta precursor protein |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-31(GCCTAAATAGCA,+,0.00)" |
