Difference between revisions of "TSS:Hg 238262.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC137482:62 BC137483:62 KJ905391:96 ENST00000522557.1:97 |chr=chr20 |cpg_percent=0.04 |distance=62 |distance_to_tss=35741 |end=57489128 |entrez_id=14069...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CT27= | ||
| + | |CTCF-T= | ||
| + | |HMGB1L1= | ||
|all_trans=BC137482:62 BC137483:62 KJ905391:96 ENST00000522557.1:97 | |all_trans=BC137482:62 BC137483:62 KJ905391:96 ENST00000522557.1:97 | ||
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |dJ579F20.2= | ||
|distance=62 | |distance=62 | ||
|distance_to_tss=35741 | |distance_to_tss=35741 | ||
|end=57489128 | |end=57489128 | ||
| + | |end_of_center_position=26170732 | ||
|entrez_id=140690 | |entrez_id=140690 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=BORIS | + | |gene_alias=BORIS |
|gene_description=CCCTC-binding factor like | |gene_description=CCCTC-binding factor like | ||
|gene_id=140690 | |gene_id=140690 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=57489123 | |start=57489123 | ||
| + | |start_of_center_position=26170731 | ||
|strand=- | |strand=- | ||
|transcript_name=BC137482 BC137483 | |transcript_name=BC137482 BC137483 | ||
Revision as of 15:29, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 26170731 |
|---|---|
| End of the center position in the TSS region: | 26170732 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC137482 BC137483 |
|---|---|
| Distance: | 62 |
| Num_trans: | 4 |
| All_trans: | BC137482:62 BC137483:62 KJ905391:96 ENST00000522557.1:97 |
TATA-Box annotation
| Distance to TSS: | 35741 |
|---|---|
| Nearest PromoterID: | NM_001269041 |
| Entrez ID: | 140690 |
| Nearest Unigene: | Hs.131543 |
| Nearest Refseq: | NM_080618 |
| Nearest Ensembl: | ENSG00000124092 |
| Gene Name: | CCCTC-binding factor like |
| Gene Alias: | BORIS |
| Gene Description: | CCCTC-binding factor like |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
