Difference between revisions of "TSS:Hg 190001.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000359726.7:0 NM_001136131:0 uc011aci.3:0 AK296229:0 NM_000484:288 NM_001136130:288 NM_001204302:288 NM_001204303:288 NM_001204301:288 NM_201414:2...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ABETA= | ||
| + | |ABPP= | ||
| + | |AD1= | ||
| + | |APPI= | ||
| + | |CTFgamma= | ||
| + | |CVAP= | ||
| + | |PN-II= | ||
| + | |PN2= | ||
|all_trans=ENST00000359726.7:0 NM_001136131:0 uc011aci.3:0 AK296229:0 NM_000484:288 NM_001136130:288 NM_001204302:288 NM_001204303:288 NM_001204301:288 NM_201414:288 NM_201413:288 NM_001136129:288 ENST00000357903.7:321 uc002yma.4:321 M35675:338 ENST00000348990.9:341 uc002ymb.4:341 Y00264:341 AK297412:341 AK294534:341 AK298861:341 BC065529:357 BC065523:357 ENST00000354192.7:361 uc010glj.4:361 AF282245:361 ENST00000474136.5:362 uc061zhv.1:362 BC004369:362 X06989:370 AK297229:424 AK312326:424 ENST00000358918.7:441 uc021whz.2:441 ENST00000346798.7:454 ENST00000439274.6:454 uc002ylz.4:454 uc011ach.3:454 AB384791:483 EU832797:488 GQ129348:488 KJ901289:488 | |all_trans=ENST00000359726.7:0 NM_001136131:0 uc011aci.3:0 AK296229:0 NM_000484:288 NM_001136130:288 NM_001204302:288 NM_001204303:288 NM_001204301:288 NM_201414:288 NM_201413:288 NM_001136129:288 ENST00000357903.7:321 uc002yma.4:321 M35675:338 ENST00000348990.9:341 uc002ymb.4:341 Y00264:341 AK297412:341 AK294534:341 AK298861:341 BC065529:357 BC065523:357 ENST00000354192.7:361 uc010glj.4:361 AF282245:361 ENST00000474136.5:362 uc061zhv.1:362 BC004369:362 X06989:370 AK297229:424 AK312326:424 ENST00000358918.7:441 uc021whz.2:441 ENST00000346798.7:454 ENST00000439274.6:454 uc002ylz.4:454 uc011ach.3:454 AB384791:483 EU832797:488 GQ129348:488 KJ901289:488 | ||
|chr=chr21 | |chr=chr21 | ||
| Line 6: | Line 14: | ||
|distance_to_tss=8 | |distance_to_tss=8 | ||
|end=26171133 | |end=26171133 | ||
| + | |end_of_center_position=26171121 | ||
|entrez_id=351 | |entrez_id=351 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=AAA | + | |gene_alias=AAA |
|gene_description=amyloid beta precursor protein | |gene_description=amyloid beta precursor protein | ||
|gene_id=351 | |gene_id=351 | ||
| Line 24: | Line 33: | ||
|species=human | |species=human | ||
|start=26171107 | |start=26171107 | ||
| + | |start_of_center_position=26171120 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000359726.7 NM_001136131 uc011aci.3 AK296229 | |transcript_name=ENST00000359726.7 NM_001136131 uc011aci.3 AK296229 | ||
Revision as of 15:30, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26171120 |
|---|---|
| End of the center position in the TSS region: | 26171121 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000359726.7 NM_001136131 uc011aci.3 AK296229 |
|---|---|
| Distance: | 0 |
| Num_trans: | 42 |
| All_trans: | ENST00000359726.7:0 NM_001136131:0 uc011aci.3:0 AK296229:0 NM_000484:288 NM_001136130:288 NM_001204302:288 NM_001204303:288 NM_001204301:288 NM_201414:288 NM_201413:288 NM_001136129:288 ENST00000357903.7:321 uc002yma.4:321 M35675:338 ENST00000348990.9:341 uc002ymb.4:341 Y00264:341 AK297412:341 AK294534:341 AK298861:341 BC065529:357 BC065523:357 ENST00000354192.7:361 uc010glj.4:361 AF282245:361 ENST00000474136.5:362 uc061zhv.1:362 BC004369:362 X06989:370 AK297229:424 AK312326:424 ENST00000358918.7:441 uc021whz.2:441 ENST00000346798.7:454 ENST00000439274.6:454 uc002ylz.4:454 uc011ach.3:454 AB384791:483 EU832797:488 GQ129348:488 KJ901289:488 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_001136131 |
| Entrez ID: | 351 |
| Nearest Unigene: | Hs.434980 |
| Nearest Refseq: | NM_000484 |
| Nearest Ensembl: | ENSG00000142192 |
| Gene Name: | amyloid beta precursor protein |
| Gene Alias: | AAA |
| Gene Description: | amyloid beta precursor protein |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
