Difference between revisions of "TSS:Hg 233232.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000497019.6:8 uc057mdj.1:8 AK126428:8 ENST00000392302.6:-15 uc001fqf.2:-15 ENST00000489021.6:-31 uc057mdi.1:-31 NM_001007792:79 |chr=chr1 |cpg_per...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TRK= | ||
| + | |TRK1= | ||
| + | |TRKA= | ||
| + | |Trk-A= | ||
|all_trans=ENST00000497019.6:8 uc057mdj.1:8 AK126428:8 ENST00000392302.6:-15 uc001fqf.2:-15 ENST00000489021.6:-31 uc057mdi.1:-31 NM_001007792:79 | |all_trans=ENST00000497019.6:8 uc057mdj.1:8 AK126428:8 ENST00000392302.6:-15 uc001fqf.2:-15 ENST00000489021.6:-31 uc057mdi.1:-31 NM_001007792:79 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-79 | |distance_to_tss=-79 | ||
|end=156815671 | |end=156815671 | ||
| + | |end_of_center_position=58214827 | ||
|entrez_id=4914 | |entrez_id=4914 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=MTC | + | |gene_alias=MTC |
|gene_description=neurotrophic receptor tyrosine kinase 1 | |gene_description=neurotrophic receptor tyrosine kinase 1 | ||
|gene_id=4914 | |gene_id=4914 | ||
| Line 22: | Line 27: | ||
|nearest_unigene=Hs.406293 | |nearest_unigene=Hs.406293 | ||
|num_trans=8 | |num_trans=8 | ||
| + | |p140-TrkA= | ||
|species=human | |species=human | ||
|start=156815670 | |start=156815670 | ||
| + | |start_of_center_position=58214826 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000497019.6 uc057mdj.1 AK126428 | |transcript_name=ENST00000497019.6 uc057mdj.1 AK126428 | ||
Revision as of 16:43, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 58214826 |
|---|---|
| End of the center position in the TSS region: | 58214827 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000497019.6 uc057mdj.1 AK126428 |
|---|---|
| Distance: | 8 |
| Num_trans: | 8 |
| All_trans: | ENST00000497019.6:8 uc057mdj.1:8 AK126428:8 ENST00000392302.6:-15 uc001fqf.2:-15 ENST00000489021.6:-31 uc057mdi.1:-31 NM_001007792:79 |
TATA-Box annotation
| Distance to TSS: | -79 |
|---|---|
| Nearest PromoterID: | NM_001007792 |
| Entrez ID: | 4914 |
| Nearest Unigene: | Hs.406293 |
| Nearest Refseq: | NM_002529 |
| Nearest Ensembl: | ENSG00000198400 |
| Gene Name: | "neurotrophic tyrosine kinase, receptor, type 1" |
| Gene Alias: | MTC |
| Gene Description: | neurotrophic receptor tyrosine kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
