Difference between revisions of "TSS:Hg 114451.1"
From referenceTSS
| Line 11: | Line 11: | ||
|distance_to_tss=18 | |distance_to_tss=18 | ||
|end=60280564 | |end=60280564 | ||
| + | |end_of_center_position=60280559 | ||
|entrez_id=51338 | |entrez_id=51338 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias=4SPAN1 | + | |gene_alias=4SPAN1 |
|gene_description=membrane spanning 4-domains A4A | |gene_description=membrane spanning 4-domains A4A | ||
|gene_id=51338 | |gene_id=51338 | ||
| Line 29: | Line 30: | ||
|species=human | |species=human | ||
|start=60280553 | |start=60280553 | ||
| + | |start_of_center_position=60280558 | ||
|strand=+ | |strand=+ | ||
|tata_box="-53(CGATATAAAAGA,-,0.00)" | |tata_box="-53(CGATATAAAAGA,-,0.00)" | ||
Revision as of 16:59, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 60280558 |
|---|---|
| End of the center position in the TSS region: | 60280559 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000532114.5 NM_148975 NM_001243266 NM_024021 uc001npc.4 |
|---|---|
| Distance: | -13 |
| Num_trans: | 23 |
| All_trans: | ENST00000532114.5:-13 NM_148975:-13 NM_001243266:-13 NM_024021:-13 uc001npc.4:-13 ENST00000337908.4:22 uc001noz.4:22 AK292089:22 ENST00000343968.8:92 uc058bto.1:92 AK075081:92 BC020648:102 ENST00000527056.5:105 uc058btp.1:105 CU676600:110 KJ893892:110 DQ891395:111 DQ894573:111 AB022821:112 ENST00000529950.1:121 uc058btq.1:121 AK314033:134 AB013102:137 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001243266 |
| Entrez ID: | 51338 |
| Nearest Unigene: | Hs.325960 |
| Nearest Refseq: | NM_024021 |
| Nearest Ensembl: | ENSG00000110079 |
| Gene Name: | membrane spanning 4-domains A4A |
| Gene Alias: | 4SPAN1 |
| Gene Description: | membrane spanning 4-domains A4A |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-53(CGATATAAAAGA,-,0.00)" |
